HHsearch alignment for GI: 254780351 and conserved domain: COG2390
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].
Probab=96.11 E-value=0.016 Score=36.06 Aligned_cols=47 Identities=21% Similarity=0.013 Sum_probs=40.0
Q ss_pred HHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCE
Q ss_conf 93217968899999854771056799999997788788636100710
Q gi|254780351|r 65 NIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRS 111 (171)
Q Consensus 65 ~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~ 111 (171)
T Consensus 21 lYY~~gltQ~eIA~~LgiSR~~v~rlL~~Ar~~GiV~I~i~~~~~~~ 67 (321)
T COG2390 21 LYYVEGLTQSEIAERLGISRATVSRLLAKAREEGIVKISINSPVEGC 67 (321)
T ss_pred HHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCH
T ss_conf 99846887999998839889999999999998793899967987653