HHsearch alignment for GI: 254780351 and conserved domain: COG2512
>COG2512 Predicted membrane-associated trancriptional regulator [Transcription].
Probab=97.83 E-value=3.9e-05 Score=52.95 Aligned_cols=64 Identities=25% Similarity=0.239 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHH-HCCC-CCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHH
Q ss_conf 79999999999993-2179-6889999985477105679999999778878863610071056445788
Q gi|254780351|r 53 SDVNAVQALLLFNI-GDLE-LTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQS 119 (171)
Q Consensus 53 ~~l~~~q~~~L~~~-~~~~-~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~ 119 (171)
T Consensus 191 ~~L~~~e~~il~~i~~~GGri~Q~eL~r~lglsktTvsR~L~~LEk~GlIe~~K~G---~~n~V~l~~~ 256 (258)
T COG2512 191 YDLNEDEKEILDLIRERGGRITQAELRRALGLSKTTVSRILRRLEKRGLIEKEKKG---RTNIVELRDK 256 (258)
T ss_pred CCCCHHHHHHHHHHHHHCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEC---CEEEEEEECC
T ss_conf 78997899999999985897869998886099767799999999868956888708---8069999336