HHsearch alignment for GI: 254780351 and conserved domain: COG3355

Probab=98.25  E-value=1.5e-05  Score=55.57  Aligned_cols=84  Identities=13%  Similarity=0.109  Sum_probs=62.2

Q ss_pred             CCCCHHHHHHHHH-H-HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECC-CCCCEEEEE-------ECHHHHH
Q ss_conf             7999999999999-3-2179688999998547710567999999977887886361-007105644-------5788999
Q gi|254780351|r   53 SDVNAVQALLLFN-I-GDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSR-IDKRSIRIS-------LTQSGKE  122 (171)
Q Consensus        53 ~~l~~~q~~~L~~-~-~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~-~D~R~~~i~-------LT~~G~~  122 (171)
T Consensus        23 ~GLs~~Dv~v~~~LL~~~~~~tvdelae~lnr~rStv~rsl~~L~~~GlV~Rek~~~~~Ggy~yiY~~i~~ee~k~~i~~  102 (126)
T COG3355          23 YGLSELDVEVYKALLEENGPLTVDELAEILNRSRSTVYRSLQNLLEAGLVEREKVNLKGGGYYYLYKPIDPEEIKKKILK  102 (126)
T ss_pred             HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf             38968899999999864699579999999783199999999999985886666422678861488711799999999999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999999
Q gi|254780351|r  123 IAETISQLYQRHIE  136 (171)
Q Consensus       123 ~~~~~~~~~~~~~~  136 (171)
T Consensus       103 ~l~~w~~~~~~~i~  116 (126)
T COG3355         103 DLDEWYDKMKQLIE  116 (126)
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             99999999999999