HHsearch alignment for GI: 254780351 and conserved domain: COG3888
>COG3888 Predicted transcriptional regulator [Transcription].
Probab=95.21 E-value=0.061 Score=32.41 Aligned_cols=47 Identities=23% Similarity=0.198 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEC
Q ss_conf 7968899999854771056799999997788788636100710564457
Q gi|254780351|r 69 LELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLT 117 (171)
Q Consensus 69 ~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT 117 (171)
T Consensus 19 ~GI~Q~eIeel~GlSKStvSEaLs~LE~~giv~RrkvsG--Ks~rVwLa 65 (321)
T COG3888 19 EGIDQTEIEELMGLSKSTVSEALSELEKQGIVKRRKVSG--KSKRVWLA 65 (321)
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECC--CCEEEEEC
T ss_conf 776587889885745647999999988568056655057--53388620