HHsearch alignment for GI: 254780351 and conserved domain: COG5631
>COG5631 Predicted transcription regulator, contains HTH domain (MarR family) [Transcription].
Probab=98.22 E-value=0.00021 Score=48.22 Aligned_cols=139 Identities=17% Similarity=0.206 Sum_probs=97.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC--CCCHHHHHHHHCCC-CCHHHHHHHHHH
Q ss_conf 307999999999999999999999999998502579999999999993217--96889999985477-105679999999
Q gi|254780351|r 19 NDISGLYVECLRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDL--ELTAGELRSRGYYL-GSNVSYNLKKLI 95 (171)
Q Consensus 19 ~~~~~~~~e~~~lv~rl~r~l~~~~~~~l~~~g~~~l~~~q~~~L~~~~~~--~~t~~eLa~~l~i~-~~tvs~~i~~Le 95 (171)
T Consensus 49 p~~sEvEyaL~~ay~Af~rW~v----rCmAaag~~~ls~~e~l~lH~irhrdR~K~laDic~~ln~eDth~itYslrKL~ 124 (199)
T COG5631 49 PDVSEVEYALMRAYEAFGRWQV----RCMAAAGEFSLSGPENLLLHIIRHRDRPKSLADICQMLNREDTHNITYSLRKLL 124 (199)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 6278999999999999889999----999985677776237788888761574156999999856332104799999998
Q ss_pred HCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 778878863610071056445788999999999999999999985349998999999999999999985
Q gi|254780351|r 96 DLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDDFIAMNKLLQRLNRFWG 164 (171)
Q Consensus 96 ~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~~~l~~~~~ls~ee~~~l~~~L~rler~~~ 164 (171)
T Consensus 125 k~gLit~t~~g---kevTy~vTa~G~~acarYa~IRe~lLid~vt~~~e~~~~l~elArllr~mtG~ye 190 (199)
T COG5631 125 KGGLITRTGSG---KEVTYEVTALGHRACARYADIREVLLIDAVTRIPEMADKLEELARLLRLMTGIYE 190 (199)
T ss_pred HCCCEECCCCC---CEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55654237887---5578987155088999999999999884146786166689999999999988999