HHsearch alignment for GI: 254780351 and conserved domain: PRK00082
>PRK00082 hrcA heat-inducible transcription repressor; Provisional.
Probab=91.12 E-value=1.2 Score=23.97 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=41.6
Q ss_pred CCCCCHHHHHHH--HCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHH
Q ss_conf 179688999998--5477105679999999778878863610071056445788999999
Q gi|254780351|r 68 DLELTAGELRSR--GYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAE 125 (171)
Q Consensus 68 ~~~~t~~eLa~~--l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~ 125 (171)
T Consensus 23 g~PVGSk~L~~~~~l~~SsATIRNeMa~LE~~G~L~qp-HTSAGRI----PT~kGYR~YV 77 (339)
T PRK00082 23 GEPVGSKTLSERYGLGVSSATIRNDMADLEELGLLEKP-HTSSGRI----PTDKGYRYFV 77 (339)
T ss_pred CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC-CCCCCCC----CCHHHHHHHH
T ss_conf 98556799997649997817899999999978783679-8999878----5678999999