HHsearch alignment for GI: 254780351 and conserved domain: PRK00118
>PRK00118 putative DNA-binding protein; Validated.
Probab=92.09 E-value=0.35 Score=27.47 Aligned_cols=42 Identities=14% Similarity=-0.032 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 999999999993217968899999854771056799999997
Q gi|254780351|r 55 VNAVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLID 96 (171)
Q Consensus 55 l~~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~ 96 (171)
T Consensus 18 LT~kQ~~~~~lyy~~DlSl~EIAe~~~iSRQaV~D~ikr~~~ 59 (105)
T PRK00118 18 LTEKQRNYMELYYLDDYSLGEIAEEFNVSRQAVYDNIKRTEK 59 (105)
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 559999999999885499999989969859999999999999