HHsearch alignment for GI: 254780351 and conserved domain: PRK00118

>PRK00118 putative DNA-binding protein; Validated.
Probab=92.09  E-value=0.35  Score=27.47  Aligned_cols=42  Identities=14%  Similarity=-0.032  Sum_probs=37.5

Q ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             999999999993217968899999854771056799999997
Q gi|254780351|r   55 VNAVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLID   96 (171)
Q Consensus        55 l~~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~   96 (171)
T Consensus        18 LT~kQ~~~~~lyy~~DlSl~EIAe~~~iSRQaV~D~ikr~~~   59 (105)
T PRK00118         18 LTEKQRNYMELYYLDDYSLGEIAEEFNVSRQAVYDNIKRTEK   59 (105)
T ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             559999999999885499999989969859999999999999