HHsearch alignment for GI: 254780351 and conserved domain: PRK03601

>PRK03601 transcriptional regulator HdfR; Provisional.
Probab=97.00  E-value=0.013  Score=36.80  Aligned_cols=67  Identities=18%  Similarity=0.284  Sum_probs=49.4

Q ss_pred             HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf             999932179688999998547710567999999977---887886361007105644578899999999999999999
Q gi|254780351|r   62 LLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIE  136 (171)
Q Consensus        62 ~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~~  136 (171)
T Consensus         8 ~F~~va~~-gsft~AA~~L~isQsavS~~Ik~LE~~LG~~Lf~R~~-------~~~~LT~~G~~l~~~A~~il~~~~~   77 (275)
T PRK03601          8 TFLEVSRT-RHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHR-------NNIRLTAAGEKLLPYAETLMNTWQA   77 (275)
T ss_pred             HHHHHHHH-CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-------CCEEECHHHHHHHHHHHHHHHHHHH
T ss_conf             99999980-9999999997898789999999999996983299879-------9432998899999999999999999