HHsearch alignment for GI: 254780351 and conserved domain: PRK03837
>PRK03837 transcriptional regulator NanR; Provisional.
Probab=96.93 E-value=0.034 Score=34.06 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=58.5
Q ss_pred C-CHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHH------------------HHHHHHHHHHH
Q ss_conf 6-8899999854771056799999997788788636100710564457889------------------99999999999
Q gi|254780351|r 71 L-TAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSG------------------KEIAETISQLY 131 (171)
Q Consensus 71 ~-t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G------------------~~~~~~~~~~~ 131 (171)
T Consensus 38 Lp~E~eLae~lgVSRtpVREAL~~L~~~GlV~~~~g~g---~~V~~~~~~~~~~~~~~~~~~~~~~~~~l~el~~~R~~l 114 (243)
T PRK03837 38 LPSERELMAFFGVGRPSVREALQALKRKGLVQISHGER---ARVSRPSADTIISELSGMAKDFLSSPGGLAHFKQARLFF 114 (243)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCC---CEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 93599999997969789999999999889989950897---068357737689987789998733866799999999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999853499989999999999999999854
Q gi|254780351|r 132 QRHIESIDKVGGLSVDDFIAMNKLLQRLNRFWGD 165 (171)
Q Consensus 132 ~~~~~~l~~~~~ls~ee~~~l~~~L~rler~~~~ 165 (171)
T Consensus 115 E~~aa~~-Aa~~~t~~~l~~L~~~~~~~~~~~~~ 147 (243)
T PRK03837 115 ESGLVRY-AAEHATDEQIALLRKALERNSQSLGD 147 (243)
T ss_pred HHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999-98729999999999999999986338