HHsearch alignment for GI: 254780351 and conserved domain: PRK05776
>PRK05776 DNA topoisomerase III; Provisional.
Probab=91.67 E-value=1.1 Score=24.32 Aligned_cols=53 Identities=13% Similarity=0.144 Sum_probs=40.4
Q ss_pred CCHHHHHHHHC---C-CCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 68899999854---7-710567999999977887886361007105644578899999999999
Q gi|254780351|r 71 LTAGELRSRGY---Y-LGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQL 130 (171)
Q Consensus 71 ~t~~eLa~~l~---i-~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~ 130 (171)
T Consensus 480 yTEatLi~~ME~~GIGTpATra~IIe~L~~R~Yi~~~~-------~~l~pT~~G~~li~~l~~~ 536 (675)
T PRK05776 480 YTKASLLKWMESVNIGTEATRARIIETLFKRKYLRSKG-------GKVYATPLGIGVAEILQKY 536 (675)
T ss_pred CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEC-------CEEEECHHHHHHHHHHHHH
T ss_conf 89999999986589995016899999896489699059-------9998744599999999974