HHsearch alignment for GI: 254780351 and conserved domain: PRK07141
>PRK07141 DNA topoisomerase I; Validated.
Probab=90.01 E-value=1.6 Score=23.35 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=38.8
Q ss_pred CCHHHHHHHH---CC-CCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 6889999985---47-7105679999999778878863610071056445788999999999999
Q gi|254780351|r 71 LTAGELRSRG---YY-LGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLY 131 (171)
Q Consensus 71 ~t~~eLa~~l---~i-~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~ 131 (171)
T Consensus 449 yTEasLi~~Me~~gIGtpATrA~iIe~L~~R~Yv~~~~-------k~l~pT~~G~~l~~~L~~~~ 506 (622)
T PRK07141 449 YNDGSLIEKLDDIKVGRPSTFASTVKILKDRLYVDSES-------KALVPTDFGKIVLEKLIIGF 506 (622)
T ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECC-------CEEEECHHHHHHHHHHHHHH
T ss_conf 69999999987479985202999999997577389419-------77746374999999999861