HHsearch alignment for GI: 254780351 and conserved domain: PRK10094
>PRK10094 DNA-binding transcriptional activator AllS; Provisional.
Probab=96.93 E-value=0.011 Score=37.25 Aligned_cols=70 Identities=11% Similarity=0.136 Sum_probs=51.1
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf 999999932179688999998547710567999999977---88788636100710564457889999999999999999
Q gi|254780351|r 59 QALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHI 135 (171)
Q Consensus 59 q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~ 135 (171)
T Consensus 6 ~Lr~F~aVae~-gSfs~AA~~L~isqsavS~~I~~LE~~LGv~Lf~Rt-------~R~v~LT~aG~~l~~~a~~il~~~~ 77 (308)
T PRK10094 6 TLRTFIAVAET-GSFSKAAERLCKTTATISYRIKLLEENTGVALFFRT-------TRSVTLTAAGEHLLSQARDWLSWLE 77 (308)
T ss_pred HHHHHHHHHHC-CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-------CCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999981-999999999789878999999999999699639977-------9974398899999999999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780351|r 136 E 136 (171)
Q Consensus 136 ~ 136 (171)
T Consensus 78 ~ 78 (308)
T PRK10094 78 S 78 (308)
T ss_pred H
T ss_conf 9