HHsearch alignment for GI: 254780351 and conserved domain: PRK10094

>PRK10094 DNA-binding transcriptional activator AllS; Provisional.
Probab=96.93  E-value=0.011  Score=37.25  Aligned_cols=70  Identities=11%  Similarity=0.136  Sum_probs=51.1

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf             999999932179688999998547710567999999977---88788636100710564457889999999999999999
Q gi|254780351|r   59 QALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHI  135 (171)
Q Consensus        59 q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~  135 (171)
T Consensus         6 ~Lr~F~aVae~-gSfs~AA~~L~isqsavS~~I~~LE~~LGv~Lf~Rt-------~R~v~LT~aG~~l~~~a~~il~~~~   77 (308)
T PRK10094          6 TLRTFIAVAET-GSFSKAAERLCKTTATISYRIKLLEENTGVALFFRT-------TRSVTLTAAGEHLLSQARDWLSWLE   77 (308)
T ss_pred             HHHHHHHHHHC-CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-------CCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999981-999999999789878999999999999699639977-------9974398899999999999999999


Q ss_pred             H
Q ss_conf             9
Q gi|254780351|r  136 E  136 (171)
Q Consensus       136 ~  136 (171)
T Consensus        78 ~   78 (308)
T PRK10094         78 S   78 (308)
T ss_pred             H
T ss_conf             9