HHsearch alignment for GI: 254780351 and conserved domain: PRK10163
>PRK10163 DNA-binding transcriptional repressor AllR; Provisional.
Probab=96.68 E-value=0.0046 Score=39.58 Aligned_cols=43 Identities=14% Similarity=0.013 Sum_probs=36.5
Q ss_pred HHHHHH--CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 999932--1796889999985477105679999999778878863
Q gi|254780351|r 62 LLFNIG--DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQR 104 (171)
Q Consensus 62 ~L~~~~--~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~ 104 (171)
T Consensus 30 IL~~la~~~~~ltl~eia~~lglpksT~~RlL~tL~~~G~v~~d~ 74 (271)
T PRK10163 30 ILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDS 74 (271)
T ss_pred HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 999997479997999999997919999999999999689889848