HHsearch alignment for GI: 254780351 and conserved domain: PRK11014

>PRK11014 transcriptional repressor NsrR; Provisional.
Probab=93.79  E-value=0.14  Score=30.04  Aligned_cols=59  Identities=15%  Similarity=0.195  Sum_probs=45.1

Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf             9688999998547710567999999977887886361007105644578899999999999
Q gi|254780351|r   70 ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQL  130 (171)
Q Consensus        70 ~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~  130 (171)
T Consensus        25 ~~~~~eIae~~~Ip~~~L~KIl~~L~~aGlv~S~RG~~GG--y~Lar~p~~Itl~dVi~ai   83 (141)
T PRK11014         25 MTSISEVTEVYGVSRNHMVKIINQLSRAGYVTAVRGKNGG--IRLGKPASTIRIGDVVREL   83 (141)
T ss_pred             EECHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC--EECCCCHHHCCHHHHHHHH
T ss_conf             4749999998794999999999999887956720479988--3214898879799999994