HHsearch alignment for GI: 254780351 and conserved domain: PRK11414
>PRK11414 putative DNA-binding transcriptional regulator; Provisional.
Probab=97.28 E-value=0.0095 Score=37.59 Aligned_cols=90 Identities=13% Similarity=0.088 Sum_probs=69.5
Q ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 96889999985477105679999999778878863610071056445788999999999999999999985349998999
Q gi|254780351|r 70 ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDDF 149 (171)
Q Consensus 70 ~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~~~l~~~~~ls~ee~ 149 (171)
T Consensus 34 ~L~e~~La~~lgVSRtPVREAL~rL~~eGLv~~~p~r---G~~V~~~s~~~~~ei~~~R~~LE~~a~~~-Aa~~~t~~~l 109 (221)
T PRK11414 34 RLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQ---AFTVPEVSLEQLDEINRIRYELELMAVAL-AVENLTPQDE 109 (221)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCC---CEEEECCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHH
T ss_conf 7189999999799906899999999988895650487---33750798899999999999999999999-9863999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999998
Q gi|254780351|r 150 IAMNKLLQRLNRFW 163 (171)
Q Consensus 150 ~~l~~~L~rler~~ 163 (171)
T Consensus 110 ~~L~~~~~~~~~a~ 123 (221)
T PRK11414 110 AELQELLDKLQQAQ 123 (221)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998