HHsearch alignment for GI: 254780351 and conserved domain: PRK12680
>PRK12680 transcriptional regulator CysB-like protein; Reviewed.
Probab=97.32 E-value=0.0015 Score=42.68 Aligned_cols=73 Identities=25% Similarity=0.245 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC-C--CEEEEECCCCCCEEEE-EECHHHHHHHHHHHHHHH
Q ss_conf 99999999932179688999998547710567999999977-8--8788636100710564-457889999999999999
Q gi|254780351|r 57 AVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL-G--FIKHQRSRIDKRSIRI-SLTQSGKEIAETISQLYQ 132 (171)
Q Consensus 57 ~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~-G--~i~r~~~~~D~R~~~i-~LT~~G~~~~~~~~~~~~ 132 (171)
T Consensus 3 L~QLr~f~aVa~~~~n~s~AA~~L~iSQPaVSkqIk~LE~eLGv~LF~R-------~gr~l~~LT~aG~~ll~~a~~iL~ 75 (327)
T PRK12680 3 LTQLRYLVAIADAELNITLAAARVHATQPGLSKQLKQLEDELGFLLFVR-------KGRSLDSVTPAGVEVIERARAVLS 75 (327)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEE-------CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8999999999965899999999978976799999999999859966998-------799877677869999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780351|r 133 RHIE 136 (171)
Q Consensus 133 ~~~~ 136 (171)
T Consensus 76 ~~~~ 79 (327)
T PRK12680 76 EVNN 79 (327)
T ss_pred HHHH
T ss_conf 9999