HHsearch alignment for GI: 254780351 and conserved domain: PRK12681
>PRK12681 cysB transcriptional regulator CysB; Reviewed.
Probab=97.38 E-value=0.0016 Score=42.48 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=54.3
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC-C--CEEEEECCCCCCEEEE-EECHHHHHHHHHHHHHHHH
Q ss_conf 9999999932179688999998547710567999999977-8--8788636100710564-4578899999999999999
Q gi|254780351|r 58 VQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL-G--FIKHQRSRIDKRSIRI-SLTQSGKEIAETISQLYQR 133 (171)
Q Consensus 58 ~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~-G--~i~r~~~~~D~R~~~i-~LT~~G~~~~~~~~~~~~~ 133 (171)
T Consensus 4 ~QLryf~~va~~~~n~t~AA~~L~iSQPavS~qIk~LE~eLGv~LF~R-------~gr~l~~LT~aG~~l~~~a~~iL~~ 76 (324)
T PRK12681 4 QQLRYIVEVVNHNLNVSATAESLYTSQPGISKQVRMLEDELGIQIFAR-------SGKHLTQVTPAGEEIIRIAREILSK 76 (324)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEE-------CCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999976999999999978977799999999999849961898-------8998886098899999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780351|r 134 HI 135 (171)
Q Consensus 134 ~~ 135 (171)
T Consensus 77 ~~ 78 (324)
T PRK12681 77 VE 78 (324)
T ss_pred HH
T ss_conf 99