HHsearch alignment for GI: 254780351 and conserved domain: PRK13509
>PRK13509 transcriptional repressor UlaR; Provisional.
Probab=95.19 E-value=0.053 Score=32.81 Aligned_cols=47 Identities=19% Similarity=0.095 Sum_probs=39.7
Q ss_pred HHHHHHH-CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 9999932-1796889999985477105679999999778878863610
Q gi|254780351|r 61 LLLFNIG-DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRI 107 (171)
Q Consensus 61 ~~L~~~~-~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~ 107 (171)
T Consensus 9 ~Il~~L~~~g~v~v~eLa~~~~VS~~TIRRDL~~Le~~g~l~r~~GGA 56 (251)
T PRK13509 9 ILLDMLAQLGFVTVEKVIERLGISPATARRDINKLDESGKLKKVRNGA 56 (251)
T ss_pred HHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCE
T ss_conf 999999986989899999998969989998399998789789998897