HHsearch alignment for GI: 254780351 and conserved domain: TIGR02337
>TIGR02337 HpaR homoprotocatechuate degradation operon regulator, HpaR; InterPro: IPR012712 This Helix-Turn-Helix transcriptional regulator is a member of the MarR family and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate.; GO: 0003677 DNA binding, 0016564 transcription repressor activity, 0010124 phenylacetate catabolic process, 0016481 negative regulation of transcription.
Probab=99.59 E-value=1.7e-14 Score=113.12 Aligned_cols=116 Identities=21% Similarity=0.287 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEE
Q ss_conf 9999999999999850257999999999999321-796889999985477105679999999778878863610071056
Q gi|254780351|r 35 LHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGD-LELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIR 113 (171)
Q Consensus 35 l~r~l~~~~~~~l~~~g~~~l~~~q~~~L~~~~~-~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~ 113 (171)
T Consensus 13 ~M~~FRP~L~~-------h~lTEQQWRilR~L~~~G~~e~~~LA~~A~iL~PSLTgiL~rLE~~glv~R~k~~~DQRR~~ 85 (130)
T TIGR02337 13 AMAFFRPILRE-------HGLTEQQWRILRVLAEKGSMEFTELADRACILRPSLTGILARLEKRGLVVRLKASNDQRRVY 85 (130)
T ss_pred HHHHCCHHHHH-------CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHH
T ss_conf 87412545553-------77964789999988338994868788664147996578999997458702258887744124
Q ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 4457889999999999999999999853499989999999999999
Q gi|254780351|r 114 ISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDDFIAMNKLLQRL 159 (171)
Q Consensus 114 i~LT~~G~~~~~~~~~~~~~~~~~l~~~~~ls~ee~~~l~~~L~rl 159 (171)
T Consensus 86 ~~lT~~G~~L~~~~~p~~e~~Y~~I~~--~lG~~Kl~~L~~LL~EL 129 (130)
T TIGR02337 86 ISLTKKGQALYESVSPQVEEIYAAIEE--RLGEEKLEQLLDLLEEL 129 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_conf 222378999999851569999999998--73688999999998640