HHsearch alignment for GI: 254780351 and conserved domain: TIGR02698
>TIGR02698 CopY_TcrY copper transport repressor, CopY/TcrY family; InterPro: IPR014071 This family includes metal-fist type transcriptional repressors of copper transport systems such as copYZAB of Enterococcus hirae and tcrYAZB (transferable copper resistance) of an Enterococcus faecium (Streptococcus faecium) plasmid. High levels of copper can displace zinc and prevent binding by the repressor, activating efflux by copper resistance transporters. The most closely related proteins excluded by this entry are antibiotic resistance regulators including the methicillin resistance regulatory protein MecI..
Probab=95.94 E-value=0.087 Score=31.41 Aligned_cols=106 Identities=18% Similarity=0.264 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHCCC-CC----HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
Q ss_conf 9999999999932179-68----899999854771056799999997788788636100710564457889999999999
Q gi|254780351|r 55 VNAVQALLLFNIGDLE-LT----AGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQ 129 (171)
Q Consensus 55 l~~~q~~~L~~~~~~~-~t----~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~ 129 (171)
T Consensus 2 IsDaEWEVMRvvW~~g~~~S~~~i~~L~~k~DW~~STiKTLl~RLV~KG~L~te~eG--rkfiY~a~v~e~e~~~~~~~~ 79 (130)
T TIGR02698 2 ISDAEWEVMRVVWTLGETTSKDIISVLAEKKDWKDSTIKTLLGRLVDKGLLTTEKEG--RKFIYTALVSEKEAVENAAED 79 (130)
T ss_pred CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHH
T ss_conf 774232433421048872778999986055776267899999765441323110057--720135675587889999999
Q ss_pred HHH--------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999--------999999853499989999999999999999
Q gi|254780351|r 130 LYQ--------RHIESIDKVGGLSVDDFIAMNKLLQRLNRF 162 (171)
Q Consensus 130 ~~~--------~~~~~l~~~~~ls~ee~~~l~~~L~rler~ 162 (171)
T Consensus 80 lf~~~C~~k~g~~i~~Liee~~ls~~Di~~L~~~L~~K~~~ 120 (130)
T TIGR02698 80 LFSRICSKKVGNVIADLIEESTLSQDDIEKLEKLLSEKKST 120 (130)
T ss_pred HHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99876021389999998840667876899999999876417