HHsearch alignment for GI: 254780351 and conserved domain: TIGR02698

>TIGR02698 CopY_TcrY copper transport repressor, CopY/TcrY family; InterPro: IPR014071 This family includes metal-fist type transcriptional repressors of copper transport systems such as copYZAB of Enterococcus hirae and tcrYAZB (transferable copper resistance) of an Enterococcus faecium (Streptococcus faecium) plasmid. High levels of copper can displace zinc and prevent binding by the repressor, activating efflux by copper resistance transporters. The most closely related proteins excluded by this entry are antibiotic resistance regulators including the methicillin resistance regulatory protein MecI..
Probab=95.94  E-value=0.087  Score=31.41  Aligned_cols=106  Identities=18%  Similarity=0.264  Sum_probs=80.0

Q ss_pred             CCHHHHHHHHHHHCCC-CC----HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
Q ss_conf             9999999999932179-68----899999854771056799999997788788636100710564457889999999999
Q gi|254780351|r   55 VNAVQALLLFNIGDLE-LT----AGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQ  129 (171)
Q Consensus        55 l~~~q~~~L~~~~~~~-~t----~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~  129 (171)
T Consensus         2 IsDaEWEVMRvvW~~g~~~S~~~i~~L~~k~DW~~STiKTLl~RLV~KG~L~te~eG--rkfiY~a~v~e~e~~~~~~~~   79 (130)
T TIGR02698         2 ISDAEWEVMRVVWTLGETTSKDIISVLAEKKDWKDSTIKTLLGRLVDKGLLTTEKEG--RKFIYTALVSEKEAVENAAED   79 (130)
T ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHH
T ss_conf             774232433421048872778999986055776267899999765441323110057--720135675587889999999


Q ss_pred             HHH--------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             999--------999999853499989999999999999999
Q gi|254780351|r  130 LYQ--------RHIESIDKVGGLSVDDFIAMNKLLQRLNRF  162 (171)
Q Consensus       130 ~~~--------~~~~~l~~~~~ls~ee~~~l~~~L~rler~  162 (171)
T Consensus        80 lf~~~C~~k~g~~i~~Liee~~ls~~Di~~L~~~L~~K~~~  120 (130)
T TIGR02698        80 LFSRICSKKVGNVIADLIEESTLSQDDIEKLEKLLSEKKST  120 (130)
T ss_pred             HHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             99876021389999998840667876899999999876417