HHsearch alignment for GI: 254780351 and conserved domain: TIGR03298
>TIGR03298 argP transcriptional regulator, ArgP family. ArgP used to be known as IciA. ArgP is a positive regulator of argK. It is a negative autoregulator in presence of arginine. It competes with DnaA for oriC iteron (13-mer) binding. It activates dnaA and nrd transcription. It has been demonstrated to be part of the pho regulon (PMID:10589831). ArgP mutants convey canavanine (an L-arginine structural homolog) sensitivity (PMID: 15150242).
Probab=96.89 E-value=0.01 Score=37.31 Aligned_cols=68 Identities=15% Similarity=0.041 Sum_probs=48.3
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf 999999932179688999998547710567999999977---88788636100710564457889999999999999999
Q gi|254780351|r 59 QALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHI 135 (171)
Q Consensus 59 q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~ 135 (171)
T Consensus 5 ~L~~F~aVa~~-gSfs~AA~~L~~sqsaVS~~I~~LE~~LG~~Lf~R--------tr~v~LT~aG~~l~~~a~~i~~~~~ 75 (292)
T TIGR03298 5 QLAALAAVVEE-GSFERAAAALSVTPSAVSQRIKALEERLGQPLLVR--------TQPCRATEAGQRLLRHARQVRLLEA 75 (292)
T ss_pred HHHHHHHHHHH-CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEC--------CCCCEECHHHHHHHHHHHHHHHHHH
T ss_conf 99999999981-99999999978887899999999999829623188--------9998048899999999999999999