HHsearch alignment for GI: 254780351 and conserved domain: cd00092
>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family.
Probab=96.05 E-value=0.0088 Score=37.81 Aligned_cols=37 Identities=30% Similarity=0.285 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 1796889999985477105679999999778878863
Q gi|254780351|r 68 DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQR 104 (171)
Q Consensus 68 ~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~ 104 (171)
T Consensus 23 ~l~ltr~eiA~~lG~t~eTVsR~l~~l~~~G~I~~~g 59 (67)
T cd00092 23 QLPLTRQEIADYLGLTRETVSRTLKELEEEGLISRRG 59 (67)
T ss_pred ECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC
T ss_conf 6177999999997890999999999999899489669