HHsearch alignment for GI: 254780351 and conserved domain: cd00092

>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family.
Probab=96.05  E-value=0.0088  Score=37.81  Aligned_cols=37  Identities=30%  Similarity=0.285  Sum_probs=33.7

Q ss_pred             CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf             1796889999985477105679999999778878863
Q gi|254780351|r   68 DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQR  104 (171)
Q Consensus        68 ~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~  104 (171)
T Consensus        23 ~l~ltr~eiA~~lG~t~eTVsR~l~~l~~~G~I~~~g   59 (67)
T cd00092          23 QLPLTRQEIADYLGLTRETVSRTLKELEEEGLISRRG   59 (67)
T ss_pred             ECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC
T ss_conf             6177999999997890999999999999899489669