HHsearch alignment for GI: 254780351 and conserved domain: pfam02082

>pfam02082 Rrf2 Transcriptional regulator. This family is related to pfam001022 and other transcription regulation families (personal obs: Yeats C).

Probab=92.91  E-value=0.24  Score=28.52  Aligned_cols=38  Identities=24%  Similarity=0.203  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             96889999985477105679999999778878863610
Q gi|254780351|r   70 ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRI  107 (171)
Q Consensus        70 ~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~  107 (171)
T Consensus        24 ~~s~~~iA~~~~i~~~~l~kil~~L~~~gli~s~rG~~   61 (82)
T pfam02082        24 PVTSEEIAERQNISPVYLRKILAKLRKAGLVKSVRGPG   61 (82)
T ss_pred             EECHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             49599999878909999999999810279825658999