HHsearch alignment for GI: 254780351 and conserved domain: pfam03551
>pfam03551 PadR Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.
Probab=97.39 E-value=0.0014 Score=42.87 Aligned_cols=68 Identities=18% Similarity=0.103 Sum_probs=50.5
Q ss_pred HHHHHHHHHCCCCCHHHHHHHH--------CCCCCHHHHHHHHHHHCCCEEEEECC--CCCCEEEEEECHHHHHHHHH
Q ss_conf 9999999321796889999985--------47710567999999977887886361--00710564457889999999
Q gi|254780351|r 59 QALLLFNIGDLELTAGELRSRG--------YYLGSNVSYNLKKLIDLGFIKHQRSR--IDKRSIRISLTQSGKEIAET 126 (171)
Q Consensus 59 q~~~L~~~~~~~~t~~eLa~~l--------~i~~~tvs~~i~~Le~~G~i~r~~~~--~D~R~~~i~LT~~G~~~~~~ 126 (171)
T Consensus 3 ~~~IL~~L~~~p~~GYei~~~i~~~~~~~~~~~~g~iY~~L~~Le~~G~i~~~~~~~~~~~~rk~Y~iT~~G~~~L~e 80 (81)
T pfam03551 3 QLLVLALLGEQPRYGYEIIKELEELSGGFYRPSEGTLYPILKRLEKEGLVESEWEDSGGGPPRKYYRLTDAGRRELAE 80 (81)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECHHHHHHHHC
T ss_conf 999999986089889999999999859910479676999999999889958997545899887699989889999851