HHsearch alignment for GI: 254780351 and conserved domain: pfam04492

>pfam04492 Phage_rep_O Bacteriophage replication protein O. Replication protein O is necessary for the initiation of bacteriophage DNA replication. Protein O interacts with the lambda replication origin, and also with replication protein P to form an oligomer. It is speculated that the N-terminal half interacts with the replication origin while the C terminal half mediates protein-protein interaction.

Probab=91.34  E-value=0.52  Score=26.41  Aligned_cols=51  Identities=20%  Similarity=0.208  Sum_probs=42.3

Q ss_pred             CCCCHHHHHHHHHHH------C---CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             799999999999932------1---79688999998547710567999999977887886
Q gi|254780351|r   53 SDVNAVQALLLFNIG------D---LELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQ  103 (171)
Q Consensus        53 ~~l~~~q~~~L~~~~------~---~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~  103 (171)
T Consensus        28 ~~lt~rq~kv~~aV~RkTyG~nK~~d~I~~sqi~~mtgi~~~~Vs~a~~~Li~~~vi~~~   87 (100)
T pfam04492        28 ADLSGRQLKVLLAVIRKTYGWNKPMDRVTNEQIAELTGLSRTHVSEAKKSLVKRGIIIQD   87 (100)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHC
T ss_conf             888788999999999986077850336229999999788854599999999976864414