HHsearch alignment for GI: 254780351 and conserved domain: pfam06969
>pfam06969 HemN_C HemN C-terminal region. Members of this family are all oxygen-independent coproporphyrinogen-III oxidases (HemN). This enzyme catalyses the oxygen-independent conversion of coproporphyrinogen-III to protoporphyrinogen-IX, one of the last steps in haem biosynthesis. The function of this domain is unclear, but comparison to other proteins containing a radical SAM domain (pfam04055) suggest it may be a substrate binding domain.
Probab=91.45 E-value=0.68 Score=25.67 Aligned_cols=61 Identities=20% Similarity=0.098 Sum_probs=45.5
Q ss_pred CCCHHHH----HHHHHHHCCCCCHHHHHHHHCCCCCHH-HHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHH
Q ss_conf 9999999----999993217968899999854771056-7999999977887886361007105644578899
Q gi|254780351|r 54 DVNAVQA----LLLFNIGDLELTAGELRSRGYYLGSNV-SYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGK 121 (171)
Q Consensus 54 ~l~~~q~----~~L~~~~~~~~t~~eLa~~l~i~~~tv-s~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~ 121 (171)
T Consensus 52 ~ls~~d~~~e~ii~~LR~~~Gi~~~~~~~~~g~~~~~~~~~~l~~l~~~Gll~~~~-------~~l~lT~~G~ 117 (118)
T pfam06969 52 RLSPEDRLRERLILGLRLTEGLDLAAFEQRFGLDFEEEYEPLLEKLQEDGLLELDD-------GRLRLTPRGR 117 (118)
T ss_pred ECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEC-------CEEEECCCCC
T ss_conf 38989999999999999858908999999989499998799999999889989739-------9999786856