HHsearch alignment for GI: 254780351 and conserved domain: pfam08220

>pfam08220 HTH_DeoR DeoR-like helix-turn-helix domain.
Probab=95.25  E-value=0.05  Score=32.92  Aligned_cols=45  Identities=16%  Similarity=0.138  Sum_probs=38.4

Q ss_pred             HHHHHH-CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECC
Q ss_conf             999932-179688999998547710567999999977887886361
Q gi|254780351|r   62 LLFNIG-DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSR  106 (171)
Q Consensus        62 ~L~~~~-~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~  106 (171)
T Consensus         5 Il~~l~~~~~v~i~~La~~f~VS~~TiRRDl~~L~~~g~i~R~~GG   50 (57)
T pfam08220         5 ILELLKQQGTLSVEELAELLGVSEMTIRRDLNELEEQGLLTRTHGG   50 (57)
T ss_pred             HHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             9999998697979999999895999999969999988998997495