HHsearch alignment for GI: 254780351 and conserved domain: smart00345
>smart00345 HTH_GNTR helix_turn_helix gluconate operon transcriptional repressor.
Probab=94.80 E-value=0.046 Score=33.20 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=33.3
Q ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECC
Q ss_conf 688999998547710567999999977887886361
Q gi|254780351|r 71 LTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSR 106 (171)
Q Consensus 71 ~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~ 106 (171)
T Consensus 21 Ps~~~la~~~~vSr~tvr~A~~~L~~~G~i~~~~g~ 56 (60)
T smart00345 21 PSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGS 56 (60)
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 109999999894999999999999988978996685