RPSBLAST alignment of GI: 254780351 and protein with PDBid: 1lj9

>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28 Length = 144

 Score = 64.9 bits (158), Expect = 9e-12
 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 6/136 (4%)

Query: 27  ECLRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDLE-LTAGELRSRGYYLGS 85
           + LR +  + R+L  ++  EF+      +   Q L L  + +   +   ++        +
Sbjct: 2   DILREIGMIARALDSISNIEFKELS---LTRGQYLYLVRVCENPGIIQEKIAELIKVDRT 58

Query: 86  NVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLS 145
             +  +K+L + GFI  Q    +K+  RI  T+ GK +   I +  Q   +    + GLS
Sbjct: 59  TAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVRENQHSNQVA--LQGLS 116

Query: 146 VDDFIAMNKLLQRLNR 161
             +   +   L R+ +
Sbjct: 117 EVEISQLADYLVRMRK 132