RPSBLAST alignment of GI: 254780351 and protein with PDBid: 3deu

>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28 Length = 166

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 29  LRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDLE--LTAGELRSRGYYLGSN 86
           L  + R+ R+L+D       R    ++     + L NI  L    +  +L         +
Sbjct: 31  LARLVRIWRALID------HRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPS 84

Query: 87  VSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSV 146
           +   L +L D G I  Q    D+R+ RI LT+  + +   + ++  +    I  + G+S 
Sbjct: 85  LVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIAEMEEVIHKTRGEI--LAGISS 142

Query: 147 DDFIAMNKLLQRLNR 161
           ++   + KL+ +L  
Sbjct: 143 EEIELLIKLIAKLEH 157