HHsearch results for GI: 254780353 and protein with PDBid: 1suu_A
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=99.90 E-value=1.1e-21 Score=180.98 Aligned_cols=182 Identities=15% Similarity=0.246 Sum_probs=127.6
Q ss_pred CCCCEEEEECCCEEECCCCCCC------CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCC--CCCCC
Q ss_conf 6670599871010202565544------553223455555401211114781789806882787551121212--34444
Q gi|254780353|r 517 KEPITVVISNRGWIRSLKSHSV------DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSG--RGHGE 588 (753)
Q Consensus 517 ~E~v~V~LS~~GyIKr~k~~~~------~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~--~~kG~ 588 (753)
.+..++++|++|+||+.+...+ +...++++++|.+.....++..+.++++|+.|+++.+++.++|.. .++|.
T Consensus 113 ~~~~lvl~Tk~G~iKr~~l~~~~~~~~~g~~a~kL~~~D~lv~v~~~~~~~~i~i~t~~G~~lrf~~~ei~~~gr~a~GV 192 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGV 192 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCE
T ss_pred CCCEEEEEECCCCEEEEEHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEHHCCCCCCCCCCCC
T ss_conf 30159999506715566258831014021166316899778889990798347875478706984033065458776782
Q ss_pred CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCCEEEEEEC----CCCCEEEEEECCC-CEEEE
Q ss_conf 222235767653078999857998599997489789963887402333562788536----8980568896189-80999
Q gi|254780353|r 589 AIQLLIDLNHNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVS----SEEKMKLVVKVTG-DHVAV 663 (753)
Q Consensus 589 pI~~ll~l~~~EkIv~~~~~~~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk~~ikLk----~~D~li~v~~~~~-d~iil 663 (753)
. -+.|.++++++++...+++.+++++|++|++||+++++|...+|.|+.+..++ .++.++.+..+.+ |++++
T Consensus 193 k---~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e~~~~~Rg~~Gv~~~k~~~~~~~~vv~~~~v~~~d~i~l 269 (312)
T 1suu_A 193 C---GMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILL 269 (312)
T ss_dssp E---CCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEE
T ss_pred C---CEEECCCCEEEEEEEECCCCEEEEEECCCCEEECCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE
T ss_conf 0---2472699859999973588629888369966984623420025577765989804788874899999689998999
Q ss_pred EECCCCEEEEEHHHCCCCCH-HHCCEEEECCCCCEEEEE
Q ss_conf 95699389955787783361-214133421878756899
Q gi|254780353|r 664 VGENRKLLIFSIDQIPEMSR-GKGVRLQSYKDGGISDVI 701 (753)
Q Consensus 664 iT~~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~~~~~~~ 701 (753)
+|++|+++||++++||.+|| ++||++|+|++++++.+.
T Consensus 270 ~T~~g~~ir~~~~~i~~~gR~~~Gv~~~~l~~d~~v~v~ 308 (312)
T 1suu_A 270 VSKRSKALRTVAGKVSEQGKDARGIQVLFLDNDSLVSVS 308 (312)
T ss_dssp EETTCEEEEEEGGGSCBCCTTCCCEECSCCSSCCEEEEE
T ss_pred EECCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCEEEEE
T ss_conf 958998999984354777877898488988999799999