HHsearch results for GI: 254780353 and protein with PDBid: 1suu_A

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=99.90  E-value=1.1e-21  Score=180.98  Aligned_cols=182  Identities=15%  Similarity=0.246  Sum_probs=127.6

Q ss_pred             CCCCEEEEECCCEEECCCCCCC------CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCC--CCCCC
Q ss_conf             6670599871010202565544------553223455555401211114781789806882787551121212--34444
Q gi|254780353|r  517 KEPITVVISNRGWIRSLKSHSV------DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSG--RGHGE  588 (753)
Q Consensus       517 ~E~v~V~LS~~GyIKr~k~~~~------~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~--~~kG~  588 (753)
                      .+..++++|++|+||+.+...+      +...++++++|.+.....++..+.++++|+.|+++.+++.++|..  .++|.
T Consensus       113 ~~~~lvl~Tk~G~iKr~~l~~~~~~~~~g~~a~kL~~~D~lv~v~~~~~~~~i~i~t~~G~~lrf~~~ei~~~gr~a~GV  192 (312)
T 1suu_A          113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGV  192 (312)
T ss_dssp             TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCE
T ss_pred             CCCEEEEEECCCCEEEEEHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEHHCCCCCCCCCCCC
T ss_conf             30159999506715566258831014021166316899778889990798347875478706984033065458776782


Q ss_pred             CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCCEEEEEEC----CCCCEEEEEECCC-CEEEE
Q ss_conf             222235767653078999857998599997489789963887402333562788536----8980568896189-80999
Q gi|254780353|r  589 AIQLLIDLNHNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVS----SEEKMKLVVKVTG-DHVAV  663 (753)
Q Consensus       589 pI~~ll~l~~~EkIv~~~~~~~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk~~ikLk----~~D~li~v~~~~~-d~iil  663 (753)
                      .   -+.|.++++++++...+++.+++++|++|++||+++++|...+|.|+.+..++    .++.++.+..+.+ |++++
T Consensus       193 k---~i~L~~~d~v~~~~~~~~~~~ll~iT~~G~gKr~~~~e~~~~~Rg~~Gv~~~k~~~~~~~~vv~~~~v~~~d~i~l  269 (312)
T 1suu_A          193 C---GMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILL  269 (312)
T ss_dssp             E---CCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEE
T ss_pred             C---CEEECCCCEEEEEEEECCCCEEEEEECCCCEEECCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE
T ss_conf             0---2472699859999973588629888369966984623420025577765989804788874899999689998999


Q ss_pred             EECCCCEEEEEHHHCCCCCH-HHCCEEEECCCCCEEEEE
Q ss_conf             95699389955787783361-214133421878756899
Q gi|254780353|r  664 VGENRKLLIFSIDQIPEMSR-GKGVRLQSYKDGGISDVI  701 (753)
Q Consensus       664 iT~~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~~~~~~~  701 (753)
                      +|++|+++||++++||.+|| ++||++|+|++++++.+.
T Consensus       270 ~T~~g~~ir~~~~~i~~~gR~~~Gv~~~~l~~d~~v~v~  308 (312)
T 1suu_A          270 VSKRSKALRTVAGKVSEQGKDARGIQVLFLDNDSLVSVS  308 (312)
T ss_dssp             EETTCEEEEEEGGGSCBCCTTCCCEECSCCSSCCEEEEE
T ss_pred             EECCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCEEEEE
T ss_conf             958998999984354777877898488988999799999