HHsearch results for GI: 254780353 and protein with PDBid: 1zi0_A

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=99.88  E-value=1.1e-20  Score=173.40  Aligned_cols=175  Identities=18%  Similarity=0.233  Sum_probs=84.7

Q ss_pred             CCEEEEECCCEEECCCCCCC------CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCC--CCCCCCCC
Q ss_conf             70599871010202565544------55322345555540121111478178980688278755112121--23444422
Q gi|254780353|r  519 PITVVISNRGWIRSLKSHSV------DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLS--GRGHGEAI  590 (753)
Q Consensus       519 ~v~V~LS~~GyIKr~k~~~~------~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips--~~~kG~pI  590 (753)
                      .-.+++|++|.||+.....+      +...++++++|.+..+..++..+.++++|+.|++...++.++|.  +.++|.  
T Consensus       110 ~~l~~~T~~G~iKr~~l~~f~~~r~~g~~ai~L~~~Delv~v~~~~~~~~v~l~T~~G~~lrf~~~~v~~~gr~a~GV--  187 (307)
T 1zi0_A          110 VKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGV--  187 (307)
T ss_dssp             CEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCE--
T ss_pred             CEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCE--
T ss_conf             449999678717873031025767357087755899999999994799739999838748986033000378888776--


Q ss_pred             CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCCE--EEEEECCC-CCEEEEEECCC-CEEEEEEC
Q ss_conf             2235767653078999857998599997489789963887402333562--78853689-80568896189-80999956
Q gi|254780353|r  591 QLLIDLNHNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGK--TFLKVSSE-EKMKLVVKVTG-DHVAVVGE  666 (753)
Q Consensus       591 ~~ll~l~~~EkIv~~~~~~~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk--~~ikLk~~-D~li~v~~~~~-d~iiliT~  666 (753)
                       .-+.|.++++|+++...+++.+++++|.+|++||+++++|....+.|+  ..+++.+. +.++.+..+.+ |+++++|+
T Consensus       188 -~gi~L~~~d~vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~~Gv~~~k~~~~~~~~v~~~~v~~~d~ill~T~  266 (307)
T 1zi0_A          188 -RGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITD  266 (307)
T ss_dssp             -ECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEES
T ss_pred             -EEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEECCCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEEC
T ss_conf             -7057089999999986138716998744860599402143120456557142202566773899998289987999918


Q ss_pred             CCCEEEEEHHHCCCCCH-HHCCEEEECCCCC
Q ss_conf             99389955787783361-2141334218787
Q gi|254780353|r  667 NRKLLIFSIDQIPEMSR-GKGVRLQSYKDGG  696 (753)
Q Consensus       667 ~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~~  696 (753)
                      +|+++||+.++||.+|| ++||++|+|++++
T Consensus       267 ~G~~ir~~~~~i~~~gR~t~Gv~li~L~~~d  297 (307)
T 1zi0_A          267 AGTLVRTRVSEISIVGRNTQGVILIRTAEDE  297 (307)
T ss_dssp             SCCEEEEEGGGSCBCCSSCCCEECSCCCTTC
T ss_pred             CCEEEEEEHHHCCCCCCCCCCEEEEECCCCC
T ss_conf             9979998854656678889987979879999