HHsearch results for GI: 254780353 and protein with PDBid: 1zi0_A
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=99.88 E-value=1.1e-20 Score=173.40 Aligned_cols=175 Identities=18% Similarity=0.233 Sum_probs=84.7
Q ss_pred CCEEEEECCCEEECCCCCCC------CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCC--CCCCCCCC
Q ss_conf 70599871010202565544------55322345555540121111478178980688278755112121--23444422
Q gi|254780353|r 519 PITVVISNRGWIRSLKSHSV------DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLS--GRGHGEAI 590 (753)
Q Consensus 519 ~v~V~LS~~GyIKr~k~~~~------~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips--~~~kG~pI 590 (753)
.-.+++|++|.||+.....+ +...++++++|.+..+..++..+.++++|+.|++...++.++|. +.++|.
T Consensus 110 ~~l~~~T~~G~iKr~~l~~f~~~r~~g~~ai~L~~~Delv~v~~~~~~~~v~l~T~~G~~lrf~~~~v~~~gr~a~GV-- 187 (307)
T 1zi0_A 110 VKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGV-- 187 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCE--
T ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCE--
T ss_conf 449999678717873031025767357087755899999999994799739999838748986033000378888776--
Q ss_pred CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCCE--EEEEECCC-CCEEEEEECCC-CEEEEEEC
Q ss_conf 2235767653078999857998599997489789963887402333562--78853689-80568896189-80999956
Q gi|254780353|r 591 QLLIDLNHNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGK--TFLKVSSE-EKMKLVVKVTG-DHVAVVGE 666 (753)
Q Consensus 591 ~~ll~l~~~EkIv~~~~~~~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk--~~ikLk~~-D~li~v~~~~~-d~iiliT~ 666 (753)
.-+.|.++++|+++...+++.+++++|.+|++||+++++|....+.|+ ..+++.+. +.++.+..+.+ |+++++|+
T Consensus 188 -~gi~L~~~d~vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~~Gv~~~k~~~~~~~~v~~~~v~~~d~ill~T~ 266 (307)
T 1zi0_A 188 -RGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITD 266 (307)
T ss_dssp -ECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEES
T ss_pred -EEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEECCCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEEC
T ss_conf -7057089999999986138716998744860599402143120456557142202566773899998289987999918
Q ss_pred CCCEEEEEHHHCCCCCH-HHCCEEEECCCCC
Q ss_conf 99389955787783361-2141334218787
Q gi|254780353|r 667 NRKLLIFSIDQIPEMSR-GKGVRLQSYKDGG 696 (753)
Q Consensus 667 ~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~~ 696 (753)
+|+++||+.++||.+|| ++||++|+|++++
T Consensus 267 ~G~~ir~~~~~i~~~gR~t~Gv~li~L~~~d 297 (307)
T 1zi0_A 267 AGTLVRTRVSEISIVGRNTQGVILIRTAEDE 297 (307)
T ss_dssp SCCEEEEEGGGSCBCCSSCCCEECSCCCTTC
T ss_pred CCEEEEEEHHHCCCCCCCCCCEEEEECCCCC
T ss_conf 9979998854656678889987979879999