HHsearch results for GI: 254780353 and protein with PDBid: 1zvt_A
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 1.70A {Escherichia coli}
Probab=100.00 E-value=2.4e-43 Score=343.81 Aligned_cols=232 Identities=25% Similarity=0.477 Sum_probs=202.7
Q ss_pred CCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 67059987101020256554455322345555540121111478178980688278755112121234444222235767
Q gi|254780353|r 518 EPITVVISNRGWIRSLKSHSVDLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSGRGHGEAIQLLIDLN 597 (753)
Q Consensus 518 E~v~V~LS~~GyIKr~k~~~~~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~~~kG~pI~~ll~l~ 597 (753)
|||+|+||++||||++++|+.+.+++++|+||++.+++.|+|||+|||||+.|++|++++|+||+++++|+|+.+++.++
T Consensus 2 E~vtV~lS~~G~Ir~~kg~~~~~~~~~~Ke~D~~~~~~~~~t~d~ll~FTn~G~~y~~~v~~ip~~~~~~~~~~~~~~~~ 81 (256)
T 1zvt_A 2 EPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp CEEEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 89799992897388004888881217457888116999985898899994898799997600411124567844434344
Q ss_pred CCCEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCCEEEEEECCCCCEEEEEECCC--CEEEEEECCCCEEEEEH
Q ss_conf 6530789998579985999974897899638874023335627885368980568896189--80999956993899557
Q gi|254780353|r 598 HNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKVTG--DHVAVVGENRKLLIFSI 675 (753)
Q Consensus 598 ~~EkIv~~~~~~~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk~~ikLk~~D~li~v~~~~~--d~iiliT~~Gk~LrF~~ 675 (753)
.++.++.+..++++.+++++|++|++||+++++|.+.+++|+.+++++++|+++.+..+.+ ++++++|++|++|||+.
T Consensus 82 ~~~~~i~~~~~~~~~~ll~~T~~G~ikr~~l~~~~~~~~~Gk~~~~l~~~d~~i~~~~v~~~~~~i~l~t~~G~~l~f~~ 161 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCCCEEEEEEECCCCEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEH
T ss_conf 45531345540688429999689779998725500502357500225778832555996488549999868992898566
Q ss_pred HHCCCCCHHHCCEEEECCC------CCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8778336121413342187------8756899973388836999417756645114322544413666027552677686
Q gi|254780353|r 676 DQIPEMSRGKGVRLQSYKD------GGISDVICFKICEGLTWIDSAGRSYNRSENDLLGWLGKRGGVGSLVPKGFPRSGK 749 (753)
Q Consensus 676 ~eIr~~gRgkGVk~i~Lkd------~~~~~~~~~~~~e~~~il~~t~~g~~k~~~~~~~~~~~RggkG~~~~k~~~K~gk 749 (753)
+++|.++||+||++|++++ ++.+..+.+...+...++...+++...+..++++|+++||++|++ ++.+.|.++
T Consensus 162 ~ev~~~~rg~Gv~~~~l~~~~~~~~dd~v~~~~v~~~~~~l~v~~~~~~~~~k~~~l~~~~~~R~~kG~~-~~~~~ki~~ 240 (256)
T 1zvt_A 162 SDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTL-MRGLQRIDR 240 (256)
T ss_dssp GGSCBCSSBSCEESSCCCHHHHHTTSSCEEEEEEEC-CCEEEEEETTEEEEECHHHHHTTBCCTTSCCEE-CTTCCSCCE
T ss_pred HHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEECCHHHHHHHHHHCCCCCCC-CCCCCCCCE
T ss_conf 8844245888842471064224567747999888589976999989950532899989986542358877-777724772
Q ss_pred E
Q ss_conf 1
Q gi|254780353|r 750 F 750 (753)
Q Consensus 750 l 750 (753)
+
T Consensus 241 ~ 241 (256)
T 1zvt_A 241 V 241 (256)
T ss_dssp E
T ss_pred E
T ss_conf 8