HHsearch results for GI: 254780353 and protein with PDBid: 1zvt_A
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 1.70A {Escherichia coli}
Probab=99.16 E-value=3.1e-09 Score=87.29 Aligned_cols=176 Identities=15% Similarity=0.329 Sum_probs=123.6
Q ss_pred CCCCCEEEEECCCEEECCCCCCC--------CCCC-CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCCCCC
Q ss_conf 56670599871010202565544--------5532-23455555401211114781789806882787551121212344
Q gi|254780353|r 516 EKEPITVVISNRGWIRSLKSHSV--------DLSA-LHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSGRGH 586 (753)
Q Consensus 516 ~~E~v~V~LS~~GyIKr~k~~~~--------~~~~-~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~~~k 586 (753)
...+-++++|+.|.+-.++.+.. +... ..+.+++.+..........+++|.|..|.++..+..++...+..
T Consensus 42 ~t~d~ll~FTn~G~~y~~~v~~ip~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ll~~T~~G~ikr~~l~~~~~~~~~ 121 (256)
T 1zvt_A 42 KSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRA 121 (256)
T ss_dssp ETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTT
T ss_pred CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEEHHHHCCCCCC
T ss_conf 58988999948987999976004111245678444343444553134554068842999968977999872550050235
Q ss_pred CCCCCCCCCCCCCCEEEEEE-EECCCCEEEEEECCCCEEEEEHHHHHCC-CCCCEEEEEECC------CCCEEEEEECCC
Q ss_conf 44222235767653078999-8579985999974897899638874023-335627885368------980568896189
Q gi|254780353|r 587 GEAIQLLIDLNHNQDIVTAF-VYDSTCKLLVVSSKGNAFIVEESEIIAN-TRKGKTFLKVSS------EEKMKLVVKVTG 658 (753)
Q Consensus 587 G~pI~~ll~l~~~EkIv~~~-~~~~~~~lll~Tk~G~ikr~~l~~~~~~-~k~Gk~~ikLk~------~D~li~v~~~~~ 658 (753)
|.-+ +.+.+++.++.+. ..+++..++++|++|++-+.+.+++... +..|..++++++ +|.+..+...++
T Consensus 122 Gk~~---~~l~~~d~~i~~~~v~~~~~~i~l~t~~G~~l~f~~~ev~~~~rg~Gv~~~~l~~~~~~~~dd~v~~~~v~~~ 198 (256)
T 1zvt_A 122 GKAL---ITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPP 198 (256)
T ss_dssp CEEC---BCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGGGSCBCSSBSCEESSCCCHHHHHTTSSCEEEEEEEC-
T ss_pred CCCC---CCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECC
T ss_conf 7500---2257788325559964885499998689928985668844245888842471064224567747999888589
Q ss_pred CEEEEEECCCCEEEEEHHHCC--CCCHH-HCCEEEECCC
Q ss_conf 809999569938995578778--33612-1413342187
Q gi|254780353|r 659 DHVAVVGENRKLLIFSIDQIP--EMSRG-KGVRLQSYKD 694 (753)
Q Consensus 659 d~iiliT~~Gk~LrF~~~eIr--~~gRg-kGVk~i~Lkd 694 (753)
++.++++..++..++..+++. .+.|| +|..++.++.
T Consensus 199 ~~~l~v~~~~~~~~~k~~~l~~~~~~R~~kG~~~~~~~k 237 (256)
T 1zvt_A 199 QSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQR 237 (256)
T ss_dssp CCEEEEEETTEEEEECHHHHHTTBCCTTSCCEECTTCCS
T ss_pred CCEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 976999989950532899989986542358877777724