HHsearch results for GI: 254780353 and protein with PDBid: 1zvu_A
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 3.00A {Escherichia coli}
Probab=99.43 E-value=3e-10 Score=94.92 Aligned_cols=180 Identities=16% Similarity=0.305 Sum_probs=126.9
Q ss_pred CCCCEEEEECCCEEECCCCCCC------CC---CCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCCCCCC
Q ss_conf 6670599871010202565544------55---32234555554012111147817898068827875511212123444
Q gi|254780353|r 517 KEPITVVISNRGWIRSLKSHSV------DL---SALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSGRGHG 587 (753)
Q Consensus 517 ~E~v~V~LS~~GyIKr~k~~~~------~~---~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~~~kG 587 (753)
..+-.+.+|..|-+..++.+.. |. .-+.+.++..+..++......+++++|..|.++..+..++.+.+..|
T Consensus 513 t~d~ll~fT~~Grvy~l~v~~lP~~~~kG~pi~~~l~l~~~E~I~~i~~~~~d~~lll~T~~G~~K~~~l~~~~~~~k~G 592 (716)
T 1zvu_A 513 SNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAG 592 (716)
T ss_dssp SSSCEEEEETTSEEEEECTTTSCCCC---CBSTTTSCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTC
T ss_pred CCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEHHHHCCCCCCC
T ss_conf 57640688358827997414576776788654341047999848998732788679999758958998513610547577
Q ss_pred CCCCCCCCCCCCCEEEEEEEEC-CCCEEEEEECCCCEEEEEHHHHHCC-CCCCEEEEEECC------CCCEEEEEECCCC
Q ss_conf 4222235767653078999857-9985999974897899638874023-335627885368------9805688961898
Q gi|254780353|r 588 EAIQLLIDLNHNQDIVTAFVYD-STCKLLVVSSKGNAFIVEESEIIAN-TRKGKTFLKVSS------EEKMKLVVKVTGD 659 (753)
Q Consensus 588 ~pI~~ll~l~~~EkIv~~~~~~-~~~~lll~Tk~G~ikr~~l~~~~~~-~k~Gk~~ikLk~------~D~li~v~~~~~d 659 (753)
..+ +++.+|++++++...+ ++..++++|++|+..+.+.+++... +.+|...|+|++ +|.++++..++.+
T Consensus 593 k~a---ikLke~Deli~~~~~~~~~d~vl~vT~~Gk~lrF~~~ev~~~grg~GVkgikL~~~~~~~~~d~v~~~~v~~~~ 669 (716)
T 1zvu_A 593 KAL---ITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQ 669 (716)
T ss_dssp EEC---BCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEESTTSCBCSSBSCEESSCCCHHHHHTTSSCEEEEEEECSS
T ss_pred CEE---EEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEEHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCC
T ss_conf 377---87689988998999659998899988898299978899886575477120730655555678559999997799
Q ss_pred -EEEEEECCCCEEEEEHHH-CCCC-CHH-HCCEEEECCCCCEEEE
Q ss_conf -099995699389955787-7833-612-1413342187875689
Q gi|254780353|r 660 -HVAVVGENRKLLIFSIDQ-IPEM-SRG-KGVRLQSYKDGGISDV 700 (753)
Q Consensus 660 -~iiliT~~Gk~LrF~~~e-Ir~~-gRg-kGVk~i~Lkd~~~~~~ 700 (753)
.++++|..|.. .....+ -+.. .|| +|+.+++++..+-+.+
T Consensus 670 ~~llv~t~~g~~-k~~~~~~~~~~~~Rg~kG~~~~~~~k~D~~ev 713 (716)
T 1zvu_A 670 STLTIHVGKRKI-KLRPEELQKVTGERGRRGTLMRGLQRIDRVEI 713 (716)
T ss_dssp CCEEEEETTEEE-EECHHHHTTSBCCTTSCCEECTTCCSCCEEEE
T ss_pred CEEEEEECCCEE-EECHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 869999889807-85878830201787888879977766783782