HHsearch results for GI: 254780353 and protein with PDBid: 1zvu_A

>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 3.00A {Escherichia coli}
Probab=99.43  E-value=3e-10  Score=94.92  Aligned_cols=180  Identities=16%  Similarity=0.305  Sum_probs=126.9

Q ss_pred             CCCCEEEEECCCEEECCCCCCC------CC---CCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCCCCCC
Q ss_conf             6670599871010202565544------55---32234555554012111147817898068827875511212123444
Q gi|254780353|r  517 KEPITVVISNRGWIRSLKSHSV------DL---SALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSGRGHG  587 (753)
Q Consensus       517 ~E~v~V~LS~~GyIKr~k~~~~------~~---~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~~~kG  587 (753)
                      ..+-.+.+|..|-+..++.+..      |.   .-+.+.++..+..++......+++++|..|.++..+..++.+.+..|
T Consensus       513 t~d~ll~fT~~Grvy~l~v~~lP~~~~kG~pi~~~l~l~~~E~I~~i~~~~~d~~lll~T~~G~~K~~~l~~~~~~~k~G  592 (716)
T 1zvu_A          513 SNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAG  592 (716)
T ss_dssp             SSSCEEEEETTSEEEEECTTTSCCCC---CBSTTTSCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTC
T ss_pred             CCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEHHHHCCCCCCC
T ss_conf             57640688358827997414576776788654341047999848998732788679999758958998513610547577


Q ss_pred             CCCCCCCCCCCCCEEEEEEEEC-CCCEEEEEECCCCEEEEEHHHHHCC-CCCCEEEEEECC------CCCEEEEEECCCC
Q ss_conf             4222235767653078999857-9985999974897899638874023-335627885368------9805688961898
Q gi|254780353|r  588 EAIQLLIDLNHNQDIVTAFVYD-STCKLLVVSSKGNAFIVEESEIIAN-TRKGKTFLKVSS------EEKMKLVVKVTGD  659 (753)
Q Consensus       588 ~pI~~ll~l~~~EkIv~~~~~~-~~~~lll~Tk~G~ikr~~l~~~~~~-~k~Gk~~ikLk~------~D~li~v~~~~~d  659 (753)
                      ..+   +++.+|++++++...+ ++..++++|++|+..+.+.+++... +.+|...|+|++      +|.++++..++.+
T Consensus       593 k~a---ikLke~Deli~~~~~~~~~d~vl~vT~~Gk~lrF~~~ev~~~grg~GVkgikL~~~~~~~~~d~v~~~~v~~~~  669 (716)
T 1zvu_A          593 KAL---ITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQ  669 (716)
T ss_dssp             EEC---BCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEESTTSCBCSSBSCEESSCCCHHHHHTTSSCEEEEEEECSS
T ss_pred             CEE---EEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEEHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCC
T ss_conf             377---87689988998999659998899988898299978899886575477120730655555678559999997799


Q ss_pred             -EEEEEECCCCEEEEEHHH-CCCC-CHH-HCCEEEECCCCCEEEE
Q ss_conf             -099995699389955787-7833-612-1413342187875689
Q gi|254780353|r  660 -HVAVVGENRKLLIFSIDQ-IPEM-SRG-KGVRLQSYKDGGISDV  700 (753)
Q Consensus       660 -~iiliT~~Gk~LrF~~~e-Ir~~-gRg-kGVk~i~Lkd~~~~~~  700 (753)
                       .++++|..|.. .....+ -+.. .|| +|+.+++++..+-+.+
T Consensus       670 ~~llv~t~~g~~-k~~~~~~~~~~~~Rg~kG~~~~~~~k~D~~ev  713 (716)
T 1zvu_A          670 STLTIHVGKRKI-KLRPEELQKVTGERGRRGTLMRGLQRIDRVEI  713 (716)
T ss_dssp             CCEEEEETTEEE-EECHHHHTTSBCCTTSCCEECTTCCSCCEEEE
T ss_pred             CEEEEEECCCEE-EECHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             869999889807-85878830201787888879977766783782