HHsearch results for GI: 254780353 and protein with PDBid: 2wl2_A
>2wl2_A GYRA, DNA gyrase subunit A; isomerase, aminocoumarin antibiotic, drug target, protein-ligand complex; HET: DNA SM8; 2.62A {Escherichia coli} PDB: 1ab4_A 1x75_A*
Probab=100.00 E-value=0 Score=1247.32 Aligned_cols=481 Identities=46% Similarity=0.754 Sum_probs=461.6
Q ss_pred CCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCHHH
Q ss_conf 42456653199999988888889998510476411289704689999999868999898035405366654276887478
Q gi|254780353|r 13 VEENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIVGEVIGKLHPHGDQ 92 (753)
Q Consensus 13 ~~~~i~~~~i~~~~~~~y~~ya~~vi~~Ralpd~~DGlKpvqRril~~m~~~~~~~~~~~~K~ar~vg~v~gkyhPHGd~ 92 (753)
+.++|++++|+++|++|||+||||||++|||||+|||||||||||||||+++|++++++|.|||++||+|||+||||||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~Ya~~vi~~RaiP~~~DGlKP~qRkil~~~~~~~l~~~~~~~K~a~l~G~v~~~yHpHGe~ 82 (522)
T 2wl2_A 3 LAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDS 82 (522)
T ss_dssp -------------------CHHHHHHHHHHCCBTTTCCCHHHHHHHHHHHHTTCCTTSCCEEHHHHHHHHHHHTCCSSCT
T ss_pred CCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCCCHH
T ss_conf 43345461289999999999999999851378622488488989999998627888988425310299887436888689
Q ss_pred HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 99999996100132166132678870886779710024689985599999984218786175216799632422312345
Q gi|254780353|r 93 SVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKF 172 (753)
Q Consensus 93 s~y~a~v~maq~~~~~~pli~g~GnfGs~~~d~~Aa~RYte~rl~~~~~~ll~di~~~~v~~~~n~D~~~~EP~~lp~~~ 172 (753)
|+|+|||||||+||+|+||++|||||||++||+||||||||||||++|..||.++|+++|+|+|||||+..||.|||++|
T Consensus 83 sl~~tiv~maQ~fs~n~~l~~~qg~fgs~~g~~~Aa~RYi~trLs~~~~~l~~~~d~~~l~~~~n~Dg~~~EP~~~pp~i 162 (522)
T 2wl2_A 83 AVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKI 162 (522)
T ss_dssp HHHHHHHHTTCTTTCSSCSEEEESCBCCTTCCCBCCTTTCEEEECHHHHHHTTTTTSSCSCEEECTTSSSEEESSCCCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCC
T ss_conf 99999999966402047031588999999998643230688888799999986232254376738898631670451357
Q ss_pred CHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 26764266504677775167778899999999987286532013443203677887760106988999898503341599
Q gi|254780353|r 173 PNLLANGTSGIAVGMATSIPSHNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRV 252 (753)
Q Consensus 173 P~lL~Ng~~GIavG~at~ipphnl~ev~~a~~~~i~~~~~~~~~l~~~i~gPDFPTGG~i~~~~~~i~~~y~tG~G~i~~ 252 (753)
||||||||+|||||||||||||||+|||+||+++|++|++++.+||++||||||||||.+ .|.+|+.++|.||+|+|++
T Consensus 163 P~vLvNGa~GIgtG~sT~IP~hNp~evi~~~~~~i~~~~~~~~~l~~~i~gPdfP~g~~~-~g~~~~~~~~~~G~g~~~~ 241 (522)
T 2wl2_A 163 PNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAII-NGRRGIEEAYRTGRGKVYI 241 (522)
T ss_dssp CHHHHHCEECTTTTCCCEECCCCHHHHHHHHHHHHHCTTCCHHHHHHHCCSCCCTTCCEE-CCSHHHHHHHHHSEEEEEE
T ss_pred CHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEE-CCCCHHHHHHHCCCEEEEE
T ss_conf 489865786321343316899998999999999852765217889851889988876620-1761078886379707999
Q ss_pred EEEEEEEECC-CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 9999986437-884079995242002168999999998640222134577640676605889850454588999998754
Q gi|254780353|r 253 RARWCVEEVG-RGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAEDVRIVLFPKNRSLDPDLLMESIFM 331 (753)
Q Consensus 253 r~k~~~e~~~-~~~~~ivIteiPy~v~k~~~ie~I~~lv~~~ki~gi~dirDeSd~~~~~vi~~~~r~~~~~~vl~~Lyk 331 (753)
||+|++|... .|+++|+||||||++|+++++|+|++++++||+++|+|+|||||+++.++++.++++++++.+++.|||
T Consensus 242 r~~~~ie~~~~~~~~~i~ITELP~~~~t~~~~e~i~~lv~~kki~~i~d~~d~s~~~~vr~vI~lk~~~~~~~~~~~L~k 321 (522)
T 2wl2_A 242 RARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYS 321 (522)
T ss_dssp ECEEEEEECTTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTSSCSEEEEEECCCSSCCCEEEEECTTSCHHHHHHHHHT
T ss_pred EEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 98899983145885479998269857799999999999975997754101135788760899967876788999999986
Q ss_pred HCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 20000122331133312689722049999998999989999999999999999999999999986410789999752000
Q gi|254780353|r 332 LSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNED 411 (753)
Q Consensus 332 ~T~Lq~sf~~N~~~l~~~~~P~~~~l~eil~~f~~~R~~vi~rr~~~~L~k~~~RlhIleGl~~a~~~ID~vI~iIR~s~ 411 (753)
+|+||+||++||+++.++ .|+++++++||++|++||.++++||++|+|+++++|+|+|+|+++++.+||++|++||+++
T Consensus 322 ~tkL~ts~s~n~~~l~d~-~pk~~sl~eIL~~f~~~R~e~~~kR~~~~L~kl~~rl~il~~~~~~i~~Id~ii~iir~sk 400 (522)
T 2wl2_A 322 QTQLQVSFGINMVALHHG-QPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAP 400 (522)
T ss_dssp TSTTEEEEEEECEEEETT-EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHCS
T ss_pred HHHHHHCCCCEEEEEECC-EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 432762023038998689-6258329999999999999999999999999999999887608999983478899987068
Q ss_pred C---CCCCCCCC----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0---11000000----------------------------------2577577889988789999889999766678999
Q gi|254780353|r 412 K---PKPVMVSR----------------------------------FSLTENQVDAILNLRLRSLRKLEEYQIKSELDNL 454 (753)
Q Consensus 412 ~---~k~~L~~~----------------------------------f~lse~QA~aIL~mrL~rLt~le~~kl~~E~~eL 454 (753)
+ ++..|+++ |.|||.||+|||+|||++||++|++|+++|+++|
T Consensus 401 ~~~~ak~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LSe~QadyIL~M~L~~LT~~e~~KL~~E~~~l 480 (522)
T 2wl2_A 401 TPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKEL 480 (522)
T ss_dssp SHHHHHHHHHHSCEECTTTHHHHC----CCCSCTTCCTTSEESSSEEECCHHHHHHHHHCBGGGGSTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76999998764013430099999872242114310120005556765579999999996499997676599999999999
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
Q ss_conf 9887765442039788789999999999874177433455542000
Q gi|254780353|r 455 LAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDLGRRRTTFC 500 (753)
Q Consensus 455 ~~~i~~L~~IL~s~~~l~~iI~~EL~eikkkfgd~~~~~~RRT~ii 500 (753)
++++++|++||+|++.+|+++++||.+++++||++ |||.|+
T Consensus 481 ~~ei~eL~~iL~s~~~l~~~i~~EL~elk~ky~~~-----RrT~I~ 521 (522)
T 2wl2_A 481 LDQIAELLRILGSADRLMEVIREELELVREQFGDK-----RRTEIT 521 (522)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHCCC-----CCSEEC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC-----CCCCCC
T ss_conf 99999999996899999999999999999982898-----788614