HHsearch results for GI: 254780353 and protein with PDBid: 2xcs_B
>2xcs_B DNA gyrase subunit B, DNA gyrase subunit A; isomerase, type IIA topoisomerase; HET: DNA 5UA RXV; 2.10A {Staphylococcus aureus} PDB: 2xcr_B* 2xcq_A* 2xco_A*
Probab=100.00 E-value=0 Score=1131.75 Aligned_cols=483 Identities=43% Similarity=0.758 Sum_probs=464.7
Q ss_pred CCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCH
Q ss_conf 65424566531999999888888899985104764112897046899999998689998980354053666542768874
Q gi|254780353|r 11 TLVEENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIVGEVIGKLHPHG 90 (753)
Q Consensus 11 ~~~~~~i~~~~i~~~~~~~y~~ya~~vi~~Ralpd~~DGlKpvqRril~~m~~~~~~~~~~~~K~ar~vg~v~gkyhPHG 90 (753)
...++++..+++.++|.++|++||||+|.+|||||++||||||||||||||+++++.++++|+|||++||+|+|+|||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Raip~~~DGlKp~qRkil~~~~~~~~~~~~~~~k~a~~~g~v~~~~~~HG 283 (692)
T 2xcs_B 204 ELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHG 283 (692)
T ss_dssp --------EEEHHHHHHHHHHHHHHHHHHHTSSCBTTTCCCHHHHHHHHHHHHTTCCTTSCCEEHHHHHHHHHHHTCCSC
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCC
T ss_conf 34610355341899888999999998877404751421765789999999998567888876763165898886508885
Q ss_pred HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 78999999961001321661326788708867797100246899855999999842187861752167996324223123
Q gi|254780353|r 91 DQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPS 170 (753)
Q Consensus 91 d~s~y~a~v~maq~~~~~~pli~g~GnfGs~~~d~~Aa~RYte~rl~~~~~~ll~di~~~~v~~~~n~D~~~~EP~~lp~ 170 (753)
|+|+|+|||+|||+|++|+||++|||||||++||+|||||||||||++++..+|.++++++|+|++||||+..||++||+
T Consensus 284 e~sl~~tiv~maq~~~~n~~ll~~~G~fGs~~g~~~aa~RYi~~~l~~~~~~~~~~~~~~~~~~~~~~dg~~~EP~~~~p 363 (692)
T 2xcs_B 284 DSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPA 363 (692)
T ss_dssp HHHHHHHHHHHHCTTTCSSCSEEEESCCCCTTCCCCCCTTTCEEEECHHHHHHHTTTTTTCSCEEECTTSSCEEESSCCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 67787889998643521665300158878999996300216877517768876422365356555302555468744786
Q ss_pred CCCHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 45267642665046777751677788999999999872865320134432036778877601069889998985033415
Q gi|254780353|r 171 KFPNLLANGTSGIAVGMATSIPSHNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGF 250 (753)
Q Consensus 171 ~~P~lL~Ng~~GIavG~at~ipphnl~ev~~a~~~~i~~~~~~~~~l~~~i~gPDFPTGG~i~~~~~~i~~~y~tG~G~i 250 (753)
++|++||||++||||||||+||||||.|||+|++++|++|+++.++|++++|||||||||.|. |.+|+.++|.||+|++
T Consensus 364 ~iP~~LvNG~~GIgtG~sT~IP~hNp~eVi~~i~~~l~~~~~~~~el~~~i~gPdfPtgg~i~-g~~g~~~~y~tGrg~~ 442 (692)
T 2xcs_B 364 RFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLIL-GKSGIRRAYETGRGSI 442 (692)
T ss_dssp SSCHHHHHCEEEECSSCEEEECCBCHHHHHHHHHHHHTCTTCCHHHHTTTCCSBCCTTCCEEE-CSHHHHHHHHHSEEEE
T ss_pred CCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEE-CCCCEEEHHCCCCCCE
T ss_conf 563888736875226763156788989999999998549853589998428889899876587-7754000221787515
Q ss_pred EEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCEEEEEEEECCCCCHHHHHHHH
Q ss_conf 99999998643788407999524200216899999999864022213457764067-66058898504545889999987
Q gi|254780353|r 251 RVRARWCVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESA-EDVRIVLFPKNRSLDPDLLMESI 329 (753)
Q Consensus 251 ~~r~k~~~e~~~~~~~~ivIteiPy~v~k~~~ie~I~~lv~~~ki~gi~dirDeSd-~~~~~vi~~~~r~~~~~~vl~~L 329 (753)
++|+++.+++..+|+++|+||||||++|+++++|+|++++++||+++|+|++|||+ +.+.++++..+++.+++.+++.|
T Consensus 443 ~~~~~~~~~~~~~~k~~I~ITELP~g~wt~~yke~L~~lv~~kki~~i~d~~des~~~~~vrivi~~k~~~~~~~~~~~L 522 (692)
T 2xcs_B 443 QMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNL 522 (692)
T ss_dssp EEECEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHHHHTTCSCCEEEEEECCBTTTBSCEEEEECTTSCHHHHHHHH
T ss_pred EEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCCCCHHHHHHHH
T ss_conf 89999999994499659999825887778999999999997599776055114566652179999826887889999878
Q ss_pred HHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 54200001223311333126897220499999989999899999999999999999999999999864107899997520
Q gi|254780353|r 330 FMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRN 409 (753)
Q Consensus 330 yk~T~Lq~sf~~N~~~l~~~~~P~~~~l~eil~~f~~~R~~vi~rr~~~~L~k~~~RlhIleGl~~a~~~ID~vI~iIR~ 409 (753)
|++|+||+|||+||+++.+| .|+++++.+||+.|++||.+++.||.+|+|+++++|+|||+|+++++.+||+||++||+
T Consensus 523 ~k~tkL~tsis~N~~~l~dg-~pk~~~~~eIL~~f~~~Rle~y~KRkey~L~kle~rl~iLegl~~~i~~ID~vIkiIr~ 601 (692)
T 2xcs_B 523 YKQTPLQTSFGVNMIALVNG-RPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRE 601 (692)
T ss_dssp HHHSTTEEEEEEECEEEETT-EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT
T ss_pred HHHCCCEEEECCEEEEEECC-EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 87577322102069999889-36893259999999999999999999999999999999998099999849999999982
Q ss_pred CCC---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 000---11000000257757788998878999988999976667899998877654420397887899999999998741
Q gi|254780353|r 410 EDK---PKPVMVSRFSLTENQVDAILNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIF 486 (753)
Q Consensus 410 s~~---~k~~L~~~f~lse~QA~aIL~mrL~rLt~le~~kl~~E~~eL~~~i~~L~~IL~s~~~l~~iI~~EL~eikkkf 486 (753)
|++ ++..|+++|++|+.||+|||+|||++||++|++|+++|+++|++++++|++||+|++.+|+++++||.+++++|
T Consensus 602 sk~~~~a~~~L~~~f~lse~QadyLL~M~L~~LT~eeieKL~~E~~el~~ei~eL~~iL~s~~~l~~~i~~EL~~lkkky 681 (692)
T 2xcs_B 602 SDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRF 681 (692)
T ss_dssp CSSHHHHHHHHHHHHTCCHHHHHHHHTCBGGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999986599999999999709999757799999999999999999999986899999999999999999982
Q ss_pred CCCCCCCCCCCCEE
Q ss_conf 77433455542000
Q gi|254780353|r 487 SKSTDLGRRRTTFC 500 (753)
Q Consensus 487 gd~~~~~~RRT~ii 500 (753)
|++ |||.|.
T Consensus 682 ~~~-----RRT~Ie 690 (692)
T 2xcs_B 682 GDD-----RRTEIQ 690 (692)
T ss_dssp CCC-----CCSEEE
T ss_pred CCC-----CCCCCC
T ss_conf 898-----786215