HHsearch results for GI: 254780353 and protein with PDBid: 2xkj_E
>2xkj_E Topoisomerase IV; type IIA topoisomerase; 2.20A {Acinetobacter baumannii} PDB: 2xkk_A*
Probab=100.00 E-value=0 Score=1113.97 Aligned_cols=498 Identities=42% Similarity=0.727 Sum_probs=476.4
Q ss_pred CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCC
Q ss_conf 66542456653199999988888889998510476411289704689999999868999898035405366654276887
Q gi|254780353|r 10 NTLVEENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIVGEVIGKLHPH 89 (753)
Q Consensus 10 ~~~~~~~i~~~~i~~~~~~~y~~ya~~vi~~Ralpd~~DGlKpvqRril~~m~~~~~~~~~~~~K~ar~vg~v~gkyhPH 89 (753)
..+.+....++++.+.+.+.|+.||||+|.+|||||++||||||||||||+|+++++.++.++.|||++||+|+|+||||
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~ys~~~~~~R~iP~~~DGLKp~QRkIL~~~~k~~l~~~~k~~k~a~~vg~v~~~~yhH 345 (767)
T 2xkj_E 266 TSLAHHATENRSVAEFTEQAYLNYAMYVIMDRALPHISDGLKPVQRRIVYAMSELGLKSSGKPKKSARTVGDVLGKYHPH 345 (767)
T ss_dssp --------CEEEHHHHHHHHHHHHHHHHHHHHTCCBTTTSCCHHHHHHHHHHHHTTCCTTSCCEEHHHHHHHHHHHTCCS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 55565454564299999999987777766640256154405588899999999874057741788887889886233888
Q ss_pred HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 478999999961001321661326788708867-7971002468998559999998421878617521679963242231
Q gi|254780353|r 90 GDQSVYDSLVRLAQPFVQRYPLISGQGNFGNID-GDSAAAYRYTEARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVF 168 (753)
Q Consensus 90 Gd~s~y~a~v~maq~~~~~~pli~g~GnfGs~~-~d~~Aa~RYte~rl~~~~~~ll~di~~~~v~~~~n~D~~~~EP~~l 168 (753)
||+|+|+|||+|||+|+||+||++|||||||++ |++||||||||||||+++..+|.++|.++++|++||||+..||++|
T Consensus 346 Ge~Sl~~tiv~MAQ~fsnNipLl~p~GqFGsr~gg~daAa~RYI~t~Ls~~~~~if~~~D~~~l~y~~~~d~~~~eP~~y 425 (767)
T 2xkj_E 346 GDSACYEAMVLMAQPFSYRYPLIEGQGNWGSPDDPKSFAAMRYTEAKLSAYSELLLSELGQGTSEWQDNFDGSLKEPITL 425 (767)
T ss_dssp CHHHHHHHHHHHHCTTTCSSCSEECSSCCCBTTBTTCCCCTTTCEEEECGGGHHHHTTTTTTCSCEEECTTSSSEEESSC
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCEECCCCCEECCCCC
T ss_conf 61577788999724543187650114576766899444557888736788899861055731330311789826677522
Q ss_pred CCCCCHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 23452676426650467777516777889999999998728653201344320367788776010698899989850334
Q gi|254780353|r 169 PSKFPNLLANGTSGIAVGMATSIPSHNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRG 248 (753)
Q Consensus 169 p~~~P~lL~Ng~~GIavG~at~ipphnl~ev~~a~~~~i~~~~~~~~~l~~~i~gPDFPTGG~i~~~~~~i~~~y~tG~G 248 (753)
|++||+|||||++|||||||||||||||.|||++|+++|++++++.+++++++|||||||||.++.+.+++.++|.||+|
T Consensus 426 ~piIPmvLVNG~~GIgtG~ST~IP~hNp~eII~~i~~~l~~~~~~~e~~~~~~p~p~~p~g~~i~~~~~~~~~~~~~g~G 505 (767)
T 2xkj_E 426 PARVPNILLNGTTGIAVGMATDIPPHNLREVVKGTIALIRNPQTSDEKLAEYIPAPDLPTKAEIITPPEELLKIQTTGRG 505 (767)
T ss_dssp CCSSCHHHHHCEEEEETTEEEEECCCCHHHHHHHHHHHHHCTTCCHHHHHHHCCSCCCSSSCEECCCHHHHHHHHHHSEE
T ss_pred CCCCHHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCC
T ss_conf 65353998647864102443177987789999999999728655646786215789899874796688888887762897
Q ss_pred EEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC--EEEEEEEECCCCCHHHHH
Q ss_conf 159999999864378840799952420021689999999986402221345776406766--058898504545889999
Q gi|254780353|r 249 GFRVRARWCVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAED--VRIVLFPKNRSLDPDLLM 326 (753)
Q Consensus 249 ~i~~r~k~~~e~~~~~~~~ivIteiPy~v~k~~~ie~I~~lv~~~ki~gi~dirDeSd~~--~~~vi~~~~r~~~~~~vl 326 (753)
++.+||+++++ +++|+||||||++|+++++++|.++++++|++++.|++|+|+.. .+++++.+.+..+++.++
T Consensus 506 ~~~~r~~~~i~-----~~~I~ITELPig~wt~~yke~L~~li~~kki~~i~di~D~s~~~~~irivi~~k~~~~~~e~~~ 580 (767)
T 2xkj_E 506 SYRMRAVYTIE-----KNEIVITELPYQVSGSKVITQIADQMQAKKLPLVVDVRDESDHENPTRLVIVLRSNRIDAEAVM 580 (767)
T ss_dssp EEEEECEEEEE-----TTEEEEEECCTTCCHHHHHHHHHHHHHTTCCTTEEEEEECCCSSCSSCEEEEESCTTSCHHHHH
T ss_pred CEEEEEEEEEC-----CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHH
T ss_conf 17874368970-----6549999528725677799999999975997764212332567786699994476647999999
Q ss_pred HHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98754200001223311333126897220499999989999899999999999999999999999999864107899997
Q gi|254780353|r 327 ESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAI 406 (753)
Q Consensus 327 ~~Lyk~T~Lq~sf~~N~~~l~~~~~P~~~~l~eil~~f~~~R~~vi~rr~~~~L~k~~~RlhIleGl~~a~~~ID~vI~i 406 (753)
+.||++|+||++|++||+++..++.|+++++.|||++|++||.+++.||.+|+|+++++|+|||+||++++.+||+||++
T Consensus 581 ~~L~k~t~L~~s~s~N~~~i~~~g~~Ky~s~~EIL~eF~~~Rl~~y~KRkey~L~kle~rl~iLegli~~~~~iD~vI~i 660 (767)
T 2xkj_E 581 SHLFATTDLESSYRVNLNMIGEDGRPQVKSIRRILLEWIEIRKKTVTRRLQYHLNRIEKRLHILAGLLIAYLDIDTVIRI 660 (767)
T ss_dssp HHHHHHSTTEEEEEEECEEECTTSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHCCCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986401012110468998559974667899999999999999999999999999999999998299999829999999
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 52000011000000257757788998878999988999976667899998877654420397887899999999998741
Q gi|254780353|r 407 IRNEDKPKPVMVSRFSLTENQVDAILNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIF 486 (753)
Q Consensus 407 IR~s~~~k~~L~~~f~lse~QA~aIL~mrL~rLt~le~~kl~~E~~eL~~~i~~L~~IL~s~~~l~~iI~~EL~eikkkf 486 (753)
||++++|+..|+++|++||.||+|||+|||++||++|++++++|+++|++++++|+++|+|++.+++++++||.+++++|
T Consensus 661 Ir~s~~~k~~L~~~f~l~e~qadyLL~M~L~~LTk~e~~kL~~E~~el~~ei~eL~~iL~s~~~l~~~i~~EL~el~kky 740 (767)
T 2xkj_E 661 IREEDQPKPVLMEHFNIDEIQAEAILELKLRHLAKLEEMEIRHEQDELSAKAAIIREQLENPESLKNLIISELKEDAKKF 740 (767)
T ss_dssp HHHCSSHHHHHHHHHTCCHHHHHHHHHSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98278468999986599999999999869998452479999999999999999999997899999999999999999981
Q ss_pred CCCCCCCCCCCCEEECCCHHHHHHHHCCCCCC
Q ss_conf 77433455542000011000000110024566
Q gi|254780353|r 487 SKSTDLGRRRTTFCEVSRADKATLQQAMIEKE 518 (753)
Q Consensus 487 gd~~~~~~RRT~iie~~~~~~~~~~EdlI~~E 518 (753)
|+| |||.|.+..+ ..++..|++|++|
T Consensus 741 g~~-----RrT~I~~~~e-~~~~~~e~~i~~e 766 (767)
T 2xkj_E 741 GDE-----RRSPIVARAE-AVQIKEQDLMPAE 766 (767)
T ss_dssp CCC-----CSSCBCCCCC-CCCC---------
T ss_pred CCC-----CCCEEECCCC-CCCCCHHHCCCCC
T ss_conf 898-----8732126654-3567653357778