PSIBLAST alignment of GI: 254780353 and protein with PDB id: 2nov
>gi|119390532|pdb|2NOV|A Chain A, Breakage-Reunion Domain Of S.Pneumoniae Topo Iv: Crystal Structure Of A Gram-Positive Quinolone Target Length = 496
>gi|119390533|pdb|2NOV|B Chain B, Breakage-Reunion Domain Of S.Pneumoniae Topo Iv: Crystal Structure Of A Gram-Positive Quinolone Target Length = 496
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 168/479 (35%), Positives = 297/479 (62%), Gaps = 5/479 (1%)
Query: 15 ENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKK 74
N++ +SL + ER+ Y+ I++RA+PD+RDG KPV RRI+++M++ F +++K
Sbjct: 2 SNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRK 61
Query: 75 SARIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEA 134
SA+ VG ++G HPHGD S+YD++VR++Q + R L+ GN G++DGD AA RYTEA
Sbjct: 62 SAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEA 121
Query: 135 RMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSH 194
R++++A +LQ +++ V F +++ + EP V P+ FPNLL NG++GI+ G AT IP H
Sbjct: 122 RLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPH 181
Query: 195 NVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRA 254
N+ E+ +AA+ +ID+P I+KL+E++ GPDFPTG I++ R+ I ++Y G+G VR+
Sbjct: 182 NLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGA-IIQGRDEIKKAYETGKGRVVVRS 240
Query: 255 RWCVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAEDVRIVLF 314
+ +E++ G IV+TEIPY++ K+ L++KI ++ + ++ + ++RDES D +
Sbjct: 241 KTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAI 300
Query: 315 PKNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFR 374
+ + +L++ +F +D++ + NM + P+ + + IL ++AHRREV+
Sbjct: 301 ELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNF-TPRQVGIVPILSSYIAHRREVILA 359
Query: 375 RSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNED---KPKPVMVSRFSLTENQVDAI 431
RS F + ++R+ I++GL+ +DE+IA+IR + K + + TE Q +AI
Sbjct: 360 RSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAI 419
Query: 432 LNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKST 490
+ L+L L + ++ E L + + +++ + +N + E+REVK+ F+
Sbjct: 420 VTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPR 478