PSIBLAST alignment of GI: 254780353 and protein with PDB id: 3lpx
>gi|323462878|pdb|3LPX|A Chain A, Crystal Structure Of Gyra Length = 500
>gi|323462879|pdb|3LPX|B Chain B, Crystal Structure Of Gyra Length = 500
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 207/497 (41%), Positives = 298/497 (59%), Gaps = 45/497 (9%)
Query: 41 RAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIVGEVIGKLHPHGDQSVYDSLVR 100
RA+PD+RDG KPVHRR++ AM +G D+ A+KKSAR+VG+VIGK HPHGD +VYD++VR
Sbjct: 2 RALPDVRDGLKPVHRRVLFAMDVLGNDWNKAYKKSARVVGDVIGKYHPHGDTAVYDTIVR 61
Query: 101 LAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEARMTQVAELILQGVDEDAVDFRDTYNE 160
+AQPF RY L+ GQGNFG++DGDSAAA RYTE RM+++A IL +D++ VDF Y+
Sbjct: 62 MAQPFSLRYMLVDGQGNFGSVDGDSAAAMRYTEIRMSKIAHSILADLDKETVDFVPNYDG 121
Query: 161 EDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHNVQEICEAALALIDNPEISIEKLLEY 220
+ P V P++ PNLL NGTSGIAVGMAT+IP HN+ E+ A LALIDN E++ E++LE+
Sbjct: 122 TEHIPAVMPTRVPNLLVNGTSGIAVGMATNIPPHNLTEVINACLALIDNSELTFEEILEH 181
Query: 221 IIGPDFPTGGIIVESRESIVESYRLGRGGFRVRARWCVE-EVGRGSWCIVVTEIPYQVQK 279
I GPDFPT GII R I E+YR GRG ++RAR ++ G I+V E+PYQV K
Sbjct: 182 IPGPDFPTAGIIS-GRAGIEEAYRTGRGKIKIRARASIDVHETTGKETIIVHELPYQVNK 240
Query: 280 SRLIEKIAELIIAKRIPLLEDIRDESAEDVRIVLFPKNRSLDPDLLMESIFMLSDMETRF 339
+RLIEK+AEL+ KR+ + +RDES +D ++ R ++++ +++ L+ M+ F
Sbjct: 241 ARLIEKMAELVKDKRLEGISALRDESDKDGMRMVIEIKRGEVGEVVLNNLYKLTQMQVSF 300
Query: 340 PLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIAYLN 399
LNM L+ P++ + +L+ ++ HRREV+ RR+ F ++ R IL+GL IA N
Sbjct: 301 GLNMVALT-NGQPKIFNIKEMLEAFVLHRREVVTRRTIFELRKARDRAHILEGLSIALAN 359
Query: 400 IDEIIAIIRNEDKPKP-------------------------------------VMVSRFS 422
ID II +I+N + K + +
Sbjct: 360 IDPIIEMIKNSNNRKESEEKLISQGWELGNVANMLSEAGNDAARPEWLEPEYGIRDGLYY 419
Query: 423 LTENQVDAILNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREV 482
LT Q AI++L+L L +E +I SE LL ++ +L + + I E+ +
Sbjct: 420 LTAEQAKAIVDLQLYKLSGMEHDKILSEYKALLDLIAELMHILATPARLMEVICEELVAI 479
Query: 483 KEIFSKSTDLGRRRTTF 499
++ F RRT
Sbjct: 480 RDEFGDE-----RRTEI 491