RPSBLAST alignment for GI: 254780353 and conserved domain: PRK13979

>gnl|CDD|184434 PRK13979, PRK13979, DNA topoisomerase IV subunit A; Provisional. Length = 957
 Score =  414 bits (1067), Expect = e-116
 Identities = 226/616 (36%), Positives = 370/616 (60%), Gaps = 31/616 (5%)

Query: 16  NVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKS 75
           N+  + L  A+ E YL YA+   K+RA+PD+RDG KPVHRRI++    +       + KS
Sbjct: 12  NIIKIPLEEAMPENYLPYAVEVAKDRALPDVRDGLKPVHRRILYGAYMLKAFPDKPYYKS 71

Query: 76  ARIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEAR 135
           ARIVG+++GK HPHGD SVYD++V LAQ F  R PLI G GN+G+IDGDSAAA RYTEAR
Sbjct: 72  ARIVGDILGKYHPHGDSSVYDAMVILAQDFTTRMPLIDGHGNWGSIDGDSAAAMRYTEAR 131

Query: 136 MTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHN 195
           +T +A  +L+ +D+D V+  D Y++ + EP V P+++PNLL NG  GIAVG+AT+IP HN
Sbjct: 132 LTPIAMEMLRDIDKDVVNMVDNYSDSEKEPEVLPARYPNLLVNGAFGIAVGLATNIPPHN 191

Query: 196 VQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRAR 255
           ++E+ +  LA IDN EI+ ++L+ YI GPD PTGGI++  ++S++ +Y  G G   +RA+
Sbjct: 192 LKEVIDGTLAYIDNNEITTKELMNYIKGPDLPTGGILI-GKKSLLSAYETGEGKVTLRAK 250

Query: 256 WCVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKR----IPLLEDIRDESAED-VR 310
             +E++  G   IV+TE PY+  K++L++ I+E+   K+    +  + DIRDES  + +R
Sbjct: 251 TKIEKLENGRLGIVITEFPYRRNKAKLLQTISEMTADKKHSKALENISDIRDESDRNGIR 310

Query: 311 IVLFPKNRSLDPDL---LMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAH 367
            V+  K +S D D+   +++ ++  +D++     NM  L+ G+ P+ M L  +LK ++ H
Sbjct: 311 AVIEFK-KSADEDVAEKVLKYLYKKTDLQCNISFNMVALADGK-PETMGLKTMLKHYVEH 368

Query: 368 RREVLFRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNEDKPKPV---MVSRFSLT 424
           ++EV+ RR+   ++  ++R  I++G + A   +DEII  IR+    K     ++ +F  T
Sbjct: 369 QKEVVTRRTKKELEIAEKRFHIVEGFIKAIGIMDEIIKTIRSSKSKKDASENLIEKFGFT 428

Query: 425 ENQVDAILNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKE 484
           + Q +AIL L L  L  LE    + E   L    +K+  +L+S K+    I  E++EVKE
Sbjct: 429 DEQAEAILELMLYRLTGLEIVAFEKEYKELEKLIKKLTKILSSEKELLKVIKKELKEVKE 488

Query: 485 IFSKSTDLGRRRTTFCEVSRADKATLQQAMIEKEPITVVISNRGWIR--SLKSH---SVD 539
            +        RRT+  E     K  +++ ++  E + + +SN G+I+   LKS+   + +
Sbjct: 489 KYGD-----ERRTSIIEDDEKAKIDVEELIVV-EDVVITLSNEGFIKRIPLKSYNRSNSN 542

Query: 540 LSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNL--LSGRGHGEAIQLLI--- 594
           +  + ++EGD  K  + ++T D +L+ +  G  Y +   N+     +  GE +  +I   
Sbjct: 543 VEDIEYREGDFNKFLIQSNTKDTLLIFTDKGNMYQIKGINIPEFKWKEKGERLDEIIKGI 602

Query: 595 DLNHNQDIVTAFVYDS 610
           DL  ++ I+ A+  + 
Sbjct: 603 DLE-SEKIIEAYSIED 617