RPSBLAST alignment for GI: 254780353 and conserved domain: COG0188
>gnl|CDD|30537 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair]. Length = 804
Score = 726 bits (1876), Expect = 0.0
Identities = 312/746 (41%), Positives = 449/746 (60%), Gaps = 24/746 (3%)
Query: 14 EENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFK 73
E ++ + + ++ YL YA+S I RA+PD+RDG KPV RRI++AM E+GL +K
Sbjct: 5 SEEIEPIDIEDEMKRSYLDYAMSVIVGRALPDVRDGLKPVQRRILYAMFELGLTPDKKYK 64
Query: 74 KSARIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTE 133
KSARIVG+V+GK HPHGD S+YD+LVR+AQ F RYPL+ GQGNFG+IDGD AAA RYTE
Sbjct: 65 KSARIVGDVMGKYHPHGDSSIYDALVRMAQDFSLRYPLVDGQGNFGSIDGDPAAAMRYTE 124
Query: 134 ARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPS 193
AR++++AE +L+ +D+D VDF Y+ + EP V P++FPNLL NG+SGIAVGMAT+IP
Sbjct: 125 ARLSKIAEELLEDIDKDTVDFVPNYDGSEKEPEVLPARFPNLLVNGSSGIAVGMATNIPP 184
Query: 194 HNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVR 253
HN+ E+ +A +ALIDNP+ +I++L+E I GPDFPTGGII+ R I E+Y GRG RVR
Sbjct: 185 HNLGEVIDALIALIDNPDATIDELMEIIKGPDFPTGGIII-GRSGIREAYETGRGSIRVR 243
Query: 254 ARWCVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAED-VRIV 312
A+ +E+ G IV+TEIPYQV K++LIEKIAEL+ K+I + DIRDES + +RIV
Sbjct: 244 AKAEIEDTKNGREQIVITEIPYQVNKAKLIEKIAELVKEKKIEGISDIRDESDREGIRIV 303
Query: 313 LFPKNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVL 372
+ K R ++++ ++F L+D++T F +NM L GR P+V+ L IL E+L HR EV+
Sbjct: 304 IELK-RDAVAEVVLNNLFKLTDLQTSFNVNMLALVNGR-PKVLNLKEILSEFLEHRLEVV 361
Query: 373 FRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNEDKP---KPVMVSRFSLTENQVD 429
RR+ + + + R+ IL+GLLIA LNIDE+I IIR K +++RF L+E Q +
Sbjct: 362 TRRTEYELNKAEERLHILEGLLIALLNIDEVIEIIRESKDKPEAKEELMARFGLSEKQAE 421
Query: 430 AILNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKS 489
AIL+LRLR L LEE +I+ EL L E ++ +L S ++ + I E+ E+K+ F
Sbjct: 422 AILDLRLRRLTGLEEEKIEKELKELEKEIADLEKILASEERLLDIIKKELLEIKKKFGD- 480
Query: 490 TDLGRRRTTFCEVSRADKATLQQAMIEKEPITVVISNRGWIR--SLKSHSVD-LSALHFK 546
RRT E + + +I +E + V +S++G+I+ LK + +S L K
Sbjct: 481 ----ERRTEIVE--EEEDEIEDEDLIAEEDVVVTLSHKGYIKRVPLKGYEAQRVSGLGLK 534
Query: 547 EGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNL--LSGRGHGEAIQLLIDLNHNQDIVT 604
EGD L+ A+T D +L ++ G+ Y L L S R GE I L+ L + I
Sbjct: 535 EGDFLERLFEANTHDTLLFFTSKGRVYKLKVYELPEGSRRSRGEPIVNLLSLEKGEKITA 594
Query: 605 AFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKVTG--DHVA 662
+ L + + KG SE KGK +K+ +++ V + D +
Sbjct: 595 VLPVNDDQYLFLATKKGYVKKTSLSEFKNIRSKGKIAIKLKEGDELVSVSLTSDGDDDIL 654
Query: 663 VVGENRKLLIFSIDQIPEMSRG-KGVRLQSYKDGGISDVICFKICEGLT-WIDSAGRSYN 720
+V N K L F ++ EM RG KGV+ K+G V + + + R Y
Sbjct: 655 LVTSNGKALRFPESEVREMGRGAKGVKGIKLKEGD-KVVSLSVVEDDEAKLLTVTERGYG 713
Query: 721 RSENDLLGWLGKRGGVGSLVPKGFPR 746
+ + KRGG G ++ KG R
Sbjct: 714 KRTKISEYPVTKRGGKGVILIKGTKR 739