RPSBLAST alignment for GI: 254780353 and conserved domain: COG0188

>gnl|CDD|30537 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair]. Length = 804
 Score =  726 bits (1876), Expect = 0.0
 Identities = 312/746 (41%), Positives = 449/746 (60%), Gaps = 24/746 (3%)

Query: 14  EENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFK 73
            E ++ + +   ++  YL YA+S I  RA+PD+RDG KPV RRI++AM E+GL     +K
Sbjct: 5   SEEIEPIDIEDEMKRSYLDYAMSVIVGRALPDVRDGLKPVQRRILYAMFELGLTPDKKYK 64

Query: 74  KSARIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTE 133
           KSARIVG+V+GK HPHGD S+YD+LVR+AQ F  RYPL+ GQGNFG+IDGD AAA RYTE
Sbjct: 65  KSARIVGDVMGKYHPHGDSSIYDALVRMAQDFSLRYPLVDGQGNFGSIDGDPAAAMRYTE 124

Query: 134 ARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPS 193
           AR++++AE +L+ +D+D VDF   Y+  + EP V P++FPNLL NG+SGIAVGMAT+IP 
Sbjct: 125 ARLSKIAEELLEDIDKDTVDFVPNYDGSEKEPEVLPARFPNLLVNGSSGIAVGMATNIPP 184

Query: 194 HNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVR 253
           HN+ E+ +A +ALIDNP+ +I++L+E I GPDFPTGGII+  R  I E+Y  GRG  RVR
Sbjct: 185 HNLGEVIDALIALIDNPDATIDELMEIIKGPDFPTGGIII-GRSGIREAYETGRGSIRVR 243

Query: 254 ARWCVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAED-VRIV 312
           A+  +E+   G   IV+TEIPYQV K++LIEKIAEL+  K+I  + DIRDES  + +RIV
Sbjct: 244 AKAEIEDTKNGREQIVITEIPYQVNKAKLIEKIAELVKEKKIEGISDIRDESDREGIRIV 303

Query: 313 LFPKNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVL 372
           +  K R    ++++ ++F L+D++T F +NM  L  GR P+V+ L  IL E+L HR EV+
Sbjct: 304 IELK-RDAVAEVVLNNLFKLTDLQTSFNVNMLALVNGR-PKVLNLKEILSEFLEHRLEVV 361

Query: 373 FRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNEDKP---KPVMVSRFSLTENQVD 429
            RR+ + +   + R+ IL+GLLIA LNIDE+I IIR        K  +++RF L+E Q +
Sbjct: 362 TRRTEYELNKAEERLHILEGLLIALLNIDEVIEIIRESKDKPEAKEELMARFGLSEKQAE 421

Query: 430 AILNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKS 489
           AIL+LRLR L  LEE +I+ EL  L  E   ++ +L S ++  + I  E+ E+K+ F   
Sbjct: 422 AILDLRLRRLTGLEEEKIEKELKELEKEIADLEKILASEERLLDIIKKELLEIKKKFGD- 480

Query: 490 TDLGRRRTTFCEVSRADKATLQQAMIEKEPITVVISNRGWIR--SLKSHSVD-LSALHFK 546
                RRT   E    +     + +I +E + V +S++G+I+   LK +    +S L  K
Sbjct: 481 ----ERRTEIVE--EEEDEIEDEDLIAEEDVVVTLSHKGYIKRVPLKGYEAQRVSGLGLK 534

Query: 547 EGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNL--LSGRGHGEAIQLLIDLNHNQDIVT 604
           EGD L+    A+T D +L  ++ G+ Y L    L   S R  GE I  L+ L   + I  
Sbjct: 535 EGDFLERLFEANTHDTLLFFTSKGRVYKLKVYELPEGSRRSRGEPIVNLLSLEKGEKITA 594

Query: 605 AFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKVTG--DHVA 662
               +    L + + KG       SE      KGK  +K+   +++  V   +   D + 
Sbjct: 595 VLPVNDDQYLFLATKKGYVKKTSLSEFKNIRSKGKIAIKLKEGDELVSVSLTSDGDDDIL 654

Query: 663 VVGENRKLLIFSIDQIPEMSRG-KGVRLQSYKDGGISDVICFKICEGLT-WIDSAGRSYN 720
           +V  N K L F   ++ EM RG KGV+    K+G    V    + +     +    R Y 
Sbjct: 655 LVTSNGKALRFPESEVREMGRGAKGVKGIKLKEGD-KVVSLSVVEDDEAKLLTVTERGYG 713

Query: 721 RSENDLLGWLGKRGGVGSLVPKGFPR 746
           +        + KRGG G ++ KG  R
Sbjct: 714 KRTKISEYPVTKRGGKGVILIKGTKR 739