RPSBLAST alignment of GI: 254780353 and protein with PDBid: 1zi0

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli} Length = 307

 Score = 49.7 bits (118), Expect = 2e-06
 Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 6/162 (3%)

Query: 540 LSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSGRGHGEAIQLLIDLNHN 599
             A+   +GD L         D ++L S +GK       ++ +   +   ++  I L   
Sbjct: 137 KVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRG-IRLGEG 195

Query: 600 QDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKV--- 656
             +V+  V      +L  +  G       +E    +R  K  + +   E+  LVV     
Sbjct: 196 DKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQV 255

Query: 657 -TGDHVAVVGENRKLLIFSIDQIPEMSR-GKGVRLQSYKDGG 696
              D + ++ +   L+   + +I  + R  +GV L    +  
Sbjct: 256 DDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDE 297