RPSBLAST alignment of GI: 254780353 and protein with PDBid: 2wl2

>2wl2_A GYRA, DNA gyrase subunit A; isomerase, aminocoumarin antibiotic, drug target, protein-ligand complex; HET: DNA SM8; 2.62A {Escherichia coli} PDB: 1ab4_A 1x75_A* Length = 522

 Score =  509 bits (1313), Expect = e-145
 Identities = 218/523 (41%), Positives = 311/523 (59%), Gaps = 45/523 (8%)

Query: 13  VEENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAF 72
           +   +  V++   L+  YL YA+S I  RA+PD+RDG KPVHRR+++AM+ +G D+  A+
Sbjct: 3   LAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAY 62

Query: 73  KKSARIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYT 132
           KKSAR+VG+VIGK HPHGD +VYD++VR+AQPF  RY L+ GQGNFG+IDGDSAAA RYT
Sbjct: 63  KKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYT 122

Query: 133 EARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIP 192
           E R+ ++A  ++  ++++ VDF D Y+  +  P V P+K PNLL NG+SGIAVGMAT+IP
Sbjct: 123 EIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIP 182

Query: 193 SHNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRV 252
            HN+ E+    LA ID+ +ISIE L+E+I GPDFPT  II   R  I E+YR GRG   +
Sbjct: 183 PHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIIN-GRRGIEEAYRTGRGKVYI 241

Query: 253 RARWCVEEVGR-GSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAEDVRI 311
           RAR  VE   + G   I+V EIPYQV K+RLIEKIAEL+  KR+  +  +RDES +D   
Sbjct: 242 RARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMR 301

Query: 312 VLFPKNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREV 371
           ++    R    ++++ +++  + ++  F +NM  L  G+ P++M L  I+  ++ HRREV
Sbjct: 302 IVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQ-PKIMNLKDIIAAFVRHRREV 360

Query: 372 LFRRSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNEDKPKPVMV------------- 418
           + RR+ F ++    R  IL+ L +A  NID II +IR+   P                  
Sbjct: 361 VTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVA 420

Query: 419 ------------------------SRFSLTENQVDAILNLRLRSLRKLEEYQIKSELDNL 454
                                     + LTE Q  AIL+LRL+ L  LE  ++  E   L
Sbjct: 421 AMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKEL 480

Query: 455 LAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDLGRRRT 497
           L +  ++  +L S  +    I  E+  V+E F       +RRT
Sbjct: 481 LDQIAELLRILGSADRLMEVIREELELVREQFGD-----KRRT 518