HHsearch alignment for GI: 254780355 and conserved domain: PRK12351
>PRK12351 methylcitrate synthase; Provisional.
Probab=100.00 E-value=0 Score=970.08 Aligned_cols=371 Identities=39% Similarity=0.659 Sum_probs=358.7
Q ss_pred EECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 98888786238787565433447778989931999975089899999998187999899999999886406899899999
Q gi|254780355|r 41 TYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRF 120 (429)
Q Consensus 41 ~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~ 120 (429)
T Consensus 7 ~~~~GL~gv~v~~S~Is~IDg~~G~L~YRGy~i~dLa~~~~fEEva~LL~~G~LPt~~el~~f~~~l~~~~~lp~~v~~~ 86 (377)
T PRK12351 7 KVSKGLEGVVAGNTAISTVGGSGGDLTYRGYDIEDLAENCSFEEVAYLLLHGELPTKAELAAFKEKLRALRGLPAAVKDV 86 (377)
T ss_pred CCCCCCCCCEEEEEECCEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 88988899815576581464789889998934999982499999999997797939999999999999727999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98512476525789999999875206855767878898889999999999999999972798534888642468877876
Q gi|254780355|r 121 FMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHM 200 (429)
Q Consensus 121 i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~M 200 (429)
T Consensus 87 l~~~p~~~hPM~~L~~~vs~L~~~~~~~~~-~~~~~~~~~a~rliA~~p~i~a~~~r~~~g~~~i~p~~~ls~a~NfL~m 165 (377)
T PRK12351 87 LESLPASAHPMDVLRTGVSALGLFDPEAED-HSPEAARDIADRLLAKLPTIVAYWYRYRHGGDPIEPRDDLSIAANFLYM 165 (377)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 985788898078999999998732867566-9989999999999999999999999997799887898520399999998
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf 42898410147969999987563501367876301555544205654246776755421002220352899999862155
Q gi|254780355|r 201 CFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS 280 (429)
Q Consensus 201 l~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~ 280 (429)
T Consensus 166 l~g~-----~p~~~~~~~l~~~LiL~ADHe~NaSTfaaRvvaST~ad~ysav~agi~aL~GPlHGGAn~~v~~ml~eI~~ 240 (377)
T PRK12351 166 LHGE-----EPSELWVKAMDVSLILYAEHEFNASTFTARVIASTLSDMYSAITAAIGALKGPLHGGANEAVMEMLEEIGS 240 (377)
T ss_pred HCCC-----CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 4589-----99989999999999987237888058999999705987899999988863676444667999999999589
Q ss_pred CCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 35127999999821478614302774355554034689999999888608776517999999999996115314579877
Q gi|254780355|r 281 LERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYP 360 (429)
Q Consensus 281 ~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~p 360 (429)
T Consensus 241 ~~~v~~~i~~~l~~~~--rl~GFGHrvYk~~DPRa~~l~~~~~~l~~~~~--~~~~~~~a~~ie~~~~~-----~~~l~p 311 (377)
T PRK12351 241 PEEAEAYLRKRLANKE--KIMGFGHRVYKVSDPRAKILKELAEKLAKEKG--DEKLYDIAERLEKVMWE-----EKGIFP 311 (377)
T ss_pred CHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHH-----HCCCCC
T ss_conf 2577999999985589--76577876578999368999999999987349--84799999999999997-----379998
Q ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHC
Q ss_conf 84478899999849996685899999999899999999970789830045621058876870685542
Q gi|254780355|r 361 NVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPLEER 428 (429)
Q Consensus 361 NvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi~~R 428 (429)
T Consensus 312 NVDfys~~l~~~lGip~~~ft~iFa~~R~~GW~AH~~Eq~~~--~~liRP~~~YvG~~~r~y~p~~~R 377 (377)
T PRK12351 312 NVDFYSGVVYHMMGIPTDLFTPIFAISRVAGWLAHIIEQRED--NRIIRPSANYVGPEDRKYVPIEER 377 (377)
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 712689999999398866788999999999999999999847--970077640149999888771129