HHsearch alignment for GI: 254780355 and conserved domain: cd06117

>cd06117 Ec2MCS_like_1 Subgroup of Escherichia coli (Ec) 2-methylcitrate synthase (2MCS)_like. 2MCS catalyzes the condensation of propionyl-coenzyme A (PrCoA) and oxalacetate (OAA) to form 2-methylcitrate and coenzyme A (CoA) during propionate metabolism. Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and OAA to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). This group contains proteins similar to the E. coli 2MCS, EcPrpC. EcPrpC is one of two CS isozymes in the gram-negative E. coli. EcPrpC is a dimeric (type I ) CS; it is induced during growth on propionate and prefers PrCoA as a substrate, but has a partial CS activity with AcCoA. This group also includes Salmonella typhimurium PrpC and Ralstonia eutropha (Re) 2-MCS1 which are also induced during growth on propionate, prefer PrCoA as substrate, but can also can use AcCoA. Re 2-MCS1 at a low rate can use butyryl-CoA and valeryl-CoA. A second Ralstonia eu
Probab=100.00  E-value=0  Score=891.82  Aligned_cols=364  Identities=31%  Similarity=0.520  Sum_probs=344.3

Q ss_pred             CCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             87862387875654334477789899319999750898999999981879998999999998864068998999999851
Q gi|254780355|r   45 AFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGF  124 (429)
Q Consensus        45 G~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~~~  124 (429)
T Consensus         2 GL~gv~~~~t~is~vdg~~g~L~YRGy~i~dLa~~~~fEEva~LLl~G~LP~~~el~~f~~~L~~~~~lp~~v~~~i~~l   81 (366)
T cd06117           2 ALSGVAAGNTALCTVGRSGNDLHYRGYDILDLAEKCEFEEVAHLLVHGKLPTKSELAAYKTKLKSLRGLPANVKTALEQL   81 (366)
T ss_pred             CCCCEEECCCCCCEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf             98985651123322508899899998659998614989999999978989599999999999998348989999999836


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHCC
Q ss_conf             2476525789999999875206855767878898889999999999999999972798-534888642468877876428
Q gi|254780355|r  125 PSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQ-PFVYPRSDLDYASNFLHMCFS  203 (429)
Q Consensus       125 p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~-~~i~Pd~~lsyaeNfL~Ml~~  203 (429)
T Consensus        82 p~~~hPm~~L~t~vs~l~~~~~~~~~~-~~~~~~~~a~~lia~~~~i~a~~~~~~~~g~~~~~~~~~~~~~~nfl~ml~g  160 (366)
T cd06117          82 PAAAHPMDVMRTGVSVLGCVLPEKEDH-PVSGARDIADRLMASLGSILLYWYHYSHNGKRIEVETDDDSIGGHFLHLLHG  160 (366)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             777884889999999985428432349-8489999999999988999999999980898578898643199999998669


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
Q ss_conf             98410147969999987563501367876301555544205654246776755421002220352899999862155351
Q gi|254780355|r  204 VPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLER  283 (429)
Q Consensus       204 ~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~~  283 (429)
T Consensus       161 ~-----~p~~~~~~~ld~~LiL~ADHe~NaSTFaaRvvaSt~adlysai~aai~aL~GPlHGGAne~v~~ml~~i~~~~~  235 (366)
T cd06117         161 E-----KPSESWEKAMHISLILYAEHEFNASTFTARVIAGTGSDMYSAITGAIGALRGPKHGGANEVAFEIQQRYESADE  235 (366)
T ss_pred             C-----CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHH
T ss_conf             9-----99889999999989887205687036889988616888899999999875788766668999999998378776


Q ss_pred             HHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             27999999821478614302774355554034689999999888608776517999999999996115314579877844
Q gi|254780355|r  284 IPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNVD  363 (429)
Q Consensus       284 v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNvD  363 (429)
T Consensus       236 ~~~~i~~~l~~~~--~i~GFGHrvYk~~DPRa~~lk~~~~~l~~~~~--~~~~~~i~~~ie~~~~~-----~k~l~pNvD  306 (366)
T cd06117         236 AEADIRRRVENKE--VVIGFGHPVYTIADPRNQVIKEVAKQLSKEGG--DMKMFDIAERLETVMWE-----EKKMFPNLD  306 (366)
T ss_pred             HHHHHHHHHCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHH-----HCCCCCCHH
T ss_conf             7999999861799--88787877688999368999999999875107--77599999999999998-----469987869


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             78899999849996685899999999899999999970789830045621058876870685
Q gi|254780355|r  364 FYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPL  425 (429)
Q Consensus       364 fysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi  425 (429)
T Consensus       307 fys~~l~~~lGip~d~ft~iFa~sR~~GW~AH~~Eq~~~--~~liRP~~~YvGp~~~~y~pi  366 (366)
T cd06117         307 WFSAVSYHMMGVPTAMFTPLFVIARTTGWSAHIIEQRQD--GKIIRPSANYTGPEDLKFVPI  366 (366)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999999298856677999999999999999999756--996686550218999998889