HHsearch results for GI: 254780355 and protein with PDBid: 1a59_A
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=0 Score=772.72 Aligned_cols=366 Identities=31% Similarity=0.521 Sum_probs=345.4
Q ss_pred EECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 98888786238787565433447778989931999975089899999998187999899999999886406899899999
Q gi|254780355|r 41 TYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRF 120 (429)
Q Consensus 41 ~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~ 120 (429)
+++||+.++.+++|+||+|||++|+|+||||+|+||+++++||||+||||+|+|||++|+++|+.++.+++.+|+++.++
T Consensus 4 ~~~~GL~gv~v~~t~is~id~~~G~L~YRG~~i~eLa~~~sfEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~ 83 (378)
T 1a59_A 4 TIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVKGA 83 (378)
T ss_dssp CCCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHHHH
T ss_pred CCCCCCCCCEEEEEEEEEEECCCCEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 77998899846347643785899879986902999972499999999997798959999999999999822698679999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98512476525789999999875206855767878898889999999999999999972798534888642468877876
Q gi|254780355|r 121 FMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHM 200 (429)
Q Consensus 121 i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~M 200 (429)
++.+|+++|||+++++++++++++++...+ .+++...+.+++|+|++|.+++++||++.|.+.+.|+++++|++||++|
T Consensus 84 ~~~~p~~~~pm~~l~~~~s~l~~~~~~~~~-~~~~~~~~~~~~lia~~~~i~a~~~~~~~g~~~~~p~~~~~~~~~~~~~ 162 (378)
T 1a59_A 84 IDLLSTACHPMDVARTAVSVLGANHARAQD-SSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLWM 162 (378)
T ss_dssp HTTSCTTSCHHHHHHHHHHHHHHTCTTTTC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHH
T ss_pred HHHCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 985164569278998864322024553334-5478889999999997467899999851589888899860099999986
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf 42898410147969999987563501367876301555544205654246776755421002220352899999862155
Q gi|254780355|r 201 CFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS 280 (429)
Q Consensus 201 l~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~ 280 (429)
+.+. .+++..+++||++||||||||+|+||||+|+++||++|+|+|++||+++|+||+||||+++|++|+++|+.
T Consensus 163 ~~~~-----~~~~~~~~~l~~~Lvl~aDHg~n~St~aaR~~aSt~~d~~~a~~aai~al~Gp~hgga~~~~~~~l~~i~~ 237 (378)
T 1a59_A 163 TFGE-----EAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGI 237 (378)
T ss_dssp HHSS-----CCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCC
T ss_pred HCCC-----CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 3357-----99989999999999997037775038999999805887477888788742787544456899999999852
Q ss_pred CCH---------HHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 351---------27999999821478614302774355554034689999999888608776517999999999996115
Q gi|254780355|r 281 LER---------IPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDE 351 (429)
Q Consensus 281 ~~~---------v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~ 351 (429)
..+ +..||.+.+++++ |||||||||||..|||+++|+++++++.+... .+++++++.++|+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~l~~~~--~i~GFGH~vy~~~DPRa~~l~~~~~~l~~~~~--~~~~~~~~~~le~~~~~-- 311 (378)
T 1a59_A 238 RKDESLDEAATRSKAWMVDALAQKK--KVMGFGHRVYKNGDSRVPTMKSALDAMIKHYD--RPEMLGLYNGLEAAMEE-- 311 (378)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTTC--CCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTT--CTHHHHHHHHHHHHHHH--
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHH--
T ss_conf 2666512788888999999985578--65467886578899478999999999987531--07999999999999997--
Q ss_pred HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3145798778447889999984999668589999999989999999997078983004562105887687068
Q gi|254780355|r 352 YFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVP 424 (429)
Q Consensus 352 ~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~p 424 (429)
.|+++||||||+|++|+.||||+++||++|++||++||+|||+||+++ ++|+||+++||||.+|+ +|
T Consensus 312 ---~k~l~pNvD~~~~~l~~~lG~p~~~~~~lf~~~R~~Gw~AH~~Eq~~~--~~l~RP~~~Y~G~~~r~-~p 378 (378)
T 1a59_A 312 ---AKQIKPNLDYPAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVAD--NALIRPLSEYNGPEQRQ-VP 378 (378)
T ss_dssp ---HHCCCBCTHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHT--CCCCCCCCCCCSCCCCC-CC
T ss_pred ---CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCEECCCCCCC-CC
T ss_conf ---379997808799999999595966667999999999999999999747--99747365421899998-98