HHsearch results for GI: 254780355 and protein with PDBid: 1a59_A

>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00  E-value=0  Score=772.72  Aligned_cols=366  Identities=31%  Similarity=0.521  Sum_probs=345.4

Q ss_pred             EECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             98888786238787565433447778989931999975089899999998187999899999999886406899899999
Q gi|254780355|r   41 TYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRF  120 (429)
Q Consensus        41 ~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~  120 (429)
                      +++||+.++.+++|+||+|||++|+|+||||+|+||+++++||||+||||+|+|||++|+++|+.++.+++.+|+++.++
T Consensus         4 ~~~~GL~gv~v~~t~is~id~~~G~L~YRG~~i~eLa~~~sfEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~   83 (378)
T 1a59_A            4 TIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVKGA   83 (378)
T ss_dssp             CCCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHHHH
T ss_pred             CCCCCCCCCEEEEEEEEEEECCCCEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             77998899846347643785899879986902999972499999999997798959999999999999822698679999


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             98512476525789999999875206855767878898889999999999999999972798534888642468877876
Q gi|254780355|r  121 FMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHM  200 (429)
Q Consensus       121 i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~M  200 (429)
                      ++.+|+++|||+++++++++++++++...+ .+++...+.+++|+|++|.+++++||++.|.+.+.|+++++|++||++|
T Consensus        84 ~~~~p~~~~pm~~l~~~~s~l~~~~~~~~~-~~~~~~~~~~~~lia~~~~i~a~~~~~~~g~~~~~p~~~~~~~~~~~~~  162 (378)
T 1a59_A           84 IDLLSTACHPMDVARTAVSVLGANHARAQD-SSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLWM  162 (378)
T ss_dssp             HTTSCTTSCHHHHHHHHHHHHHHTCTTTTC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHH
T ss_pred             HHHCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf             985164569278998864322024553334-5478889999999997467899999851589888899860099999986


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf             42898410147969999987563501367876301555544205654246776755421002220352899999862155
Q gi|254780355|r  201 CFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS  280 (429)
Q Consensus       201 l~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~  280 (429)
                      +.+.     .+++..+++||++||||||||+|+||||+|+++||++|+|+|++||+++|+||+||||+++|++|+++|+.
T Consensus       163 ~~~~-----~~~~~~~~~l~~~Lvl~aDHg~n~St~aaR~~aSt~~d~~~a~~aai~al~Gp~hgga~~~~~~~l~~i~~  237 (378)
T 1a59_A          163 TFGE-----EAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGI  237 (378)
T ss_dssp             HHSS-----CCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCC
T ss_pred             HCCC-----CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             3357-----99989999999999997037775038999999805887477888788742787544456899999999852


Q ss_pred             CCH---------HHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             351---------27999999821478614302774355554034689999999888608776517999999999996115
Q gi|254780355|r  281 LER---------IPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDE  351 (429)
Q Consensus       281 ~~~---------v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~  351 (429)
                      ..+         +..||.+.+++++  |||||||||||..|||+++|+++++++.+...  .+++++++.++|+++.+  
T Consensus       238 ~~~~~~~~~~~~~~~~v~~~l~~~~--~i~GFGH~vy~~~DPRa~~l~~~~~~l~~~~~--~~~~~~~~~~le~~~~~--  311 (378)
T 1a59_A          238 RKDESLDEAATRSKAWMVDALAQKK--KVMGFGHRVYKNGDSRVPTMKSALDAMIKHYD--RPEMLGLYNGLEAAMEE--  311 (378)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHTTC--CCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTT--CTHHHHHHHHHHHHHHH--
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHH--
T ss_conf             2666512788888999999985578--65467886578899478999999999987531--07999999999999997--


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3145798778447889999984999668589999999989999999997078983004562105887687068
Q gi|254780355|r  352 YFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVP  424 (429)
Q Consensus       352 ~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~p  424 (429)
                         .|+++||||||+|++|+.||||+++||++|++||++||+|||+||+++  ++|+||+++||||.+|+ +|
T Consensus       312 ---~k~l~pNvD~~~~~l~~~lG~p~~~~~~lf~~~R~~Gw~AH~~Eq~~~--~~l~RP~~~Y~G~~~r~-~p  378 (378)
T 1a59_A          312 ---AKQIKPNLDYPAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVAD--NALIRPLSEYNGPEQRQ-VP  378 (378)
T ss_dssp             ---HHCCCBCTHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHT--CCCCCCCCCCCSCCCCC-CC
T ss_pred             ---CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCEECCCCCCC-CC
T ss_conf             ---379997808799999999595966667999999999999999999747--99747365421899998-98