HHsearch results for GI: 254780355 and protein with PDBid: 1aj8_A
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=0 Score=796.15 Aligned_cols=370 Identities=35% Similarity=0.599 Sum_probs=354.7
Q ss_pred CCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 88878623878756543344777898993199997508989999999818799989999999988640689989999998
Q gi|254780355|r 43 DPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFM 122 (429)
Q Consensus 43 dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~ 122 (429)
+-|+.||.+|+|+||+|||++|+|+||||+|+||+++++||||+||||+|+|||++|+++|+.+|++++.+|+.+..++.
T Consensus 2 ~rGL~gv~v~~T~IS~IDg~~G~L~YRGy~i~dLa~~~tfEEVa~LL~~G~lP~~~el~~f~~~L~~~~~lp~~~~~~~~ 81 (371)
T 1aj8_A 2 AKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIME 81 (371)
T ss_dssp CGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 97779981636868037579887999894499986369999999999778798999999999999971699888999985
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 51247652578999999987520685576787889888999999999999999997279853488864246887787642
Q gi|254780355|r 123 GFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCF 202 (429)
Q Consensus 123 ~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~Ml~ 202 (429)
.+|+++|||++++++++++++++++..+..+++.....+.+++|++|++++++|+++.|++++.|+++++|++||++|++
T Consensus 82 ~~p~~~~pm~~l~~~~s~l~~~~~~~~~~~~~~~~~~~~~~l~a~~~~i~a~~~~~~~g~~~~~p~~~~s~~~~~l~ml~ 161 (371)
T 1aj8_A 82 ALPKNTHPMGALRTIISYLGNIDDSGDIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYMLH 161 (371)
T ss_dssp HSCTTCCHHHHHHHHHHHHHHHSTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 08877772565566642123211112454787888999999999999999999998679988799710408999987742
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
Q ss_conf 89841014796999998756350136787630155554420565424677675542100222035289999986215535
Q gi|254780355|r 203 SVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLE 282 (429)
Q Consensus 203 ~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~ 282 (429)
+. ++++..+++||++||||||||+|+||||+|+++||++|+|+|++||+++|+||+||||+++|++||.++++++
T Consensus 162 g~-----~~~~~~~~~l~~~Lvl~aDHg~~~St~aaR~~aSt~~~~~~a~~ag~~al~Gp~hgga~~~~~~~l~~~~~~~ 236 (371)
T 1aj8_A 162 GE-----EPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPE 236 (371)
T ss_dssp SS-----CCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGG
T ss_pred CC-----CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 89-----9988999999999999656888833899988861575087889877663279654221577899999735631
Q ss_pred HHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 12799999982147861430277435555403468999999988860877651799999999999611531457987784
Q gi|254780355|r 283 RIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNV 362 (429)
Q Consensus 283 ~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNv 362 (429)
++++||.+.+++++ +||||||||||..|||+++++++++++. .++.++.+.++++++ ++++.+|+++|||
T Consensus 237 ~~~~~v~~~~~~~~--~ipGfGH~v~~~~DpR~~~l~~~a~~~~------~~~~~~~~~~~~~~~--~~~~~~~~l~~Nv 306 (371)
T 1aj8_A 237 KVEEWFFKALQQKR--KIMGAGHRVYKTYDPRARIFKKYASKLG------DKKLFEIAERLERLV--EEYLSKKGISINV 306 (371)
T ss_dssp GHHHHHHHHHHHTC--CCTTBCCSSCSSCCHHHHHHHHHHHHHS------CHHHHHHHHHHHHHH--HHHTTTTTCCBCT
T ss_pred CHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHC------CHHHHHHHHHHHHHH--HHHHHHCCCCCCH
T ss_conf 07999998863278--7878887536789956899999999856------102578999999999--9986006988373
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC
Q ss_conf 4788999998499966858999999998999999999707898300456210588768706855429
Q gi|254780355|r 363 DFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPLEERE 429 (429)
Q Consensus 363 Dfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi~~R~ 429 (429)
|||+|++|+.||||+++||++|++||++||+|||+||+++ +||+||+++|||+.+|+|+||++||
T Consensus 307 d~~~~~l~~~lg~p~~~~~~lf~~~R~~G~~AH~~Eq~~~--~~l~RP~~~Y~G~~~r~~~p~~~r~ 371 (371)
T 1aj8_A 307 DYWSGLVFYGMKIPIELYTTIFAMGRIAGWTAHLAEYVSH--NRIIRPRLQYVGEIGKKYLPIELRR 371 (371)
T ss_dssp TTTHHHHHHTTTCCGGGHHHHHHHHHHHHHHHHHHHHHTT--CCCCCCEEEECSCCCBCCCCGGGCC
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 8899999998399844444999999999999999999877--9987866520289899987867669