HHsearch results for GI: 254780355 and protein with PDBid: 1k3p_A
>1k3p_A Citrate synthase; transferase; 2.20A {Escherichia coli} SCOP: a.103.1.1 PDB: 1owb_A* 1owc_A 1nxe_A 1nxg_A*
Probab=100.00 E-value=0 Score=1000.35 Aligned_cols=425 Identities=58% Similarity=1.002 Sum_probs=411.9
Q ss_pred CCCEEEEEECC-EEEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHC
Q ss_conf 98769999899-89997523077787510100115586189888878623878756543344777898993199997508
Q gi|254780355|r 2 TDKFAKLHLGH-EEIDLPIKEGSLGSSVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKS 80 (429)
Q Consensus 2 ~~~~~~l~~~~-~~~~lpi~~~~~~~~~~d~~~l~~~G~~~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~ 80 (429)
||||+||+++| ++|||||++||.|+++|||++|+++|++||||||.||++|||+||||||++|+|+||||||+|||+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~l~~~G~~~~dPGl~~t~~~eS~Is~IDg~~G~L~YRGy~I~dLa~~~ 80 (426)
T 1k3p_A 1 ADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDS 80 (426)
T ss_dssp CCSSSEEEEESSSCEEEEEECCSSSCCEEECTTTTTTTCCEECTTCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHS
T ss_pred CCCCEEEEECCCCEEEEEEEECCCCCCEEEEHHHCCCCEEEECCCCCCEEEEEEECEEEECCCEEEEECCEEHHHHHHCC
T ss_conf 98505999779934885345468898745504414688485488778713798778258578608999996699987259
Q ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 98999999981879998999999998864068998999999851247652578999999987520685576787889888
Q gi|254780355|r 81 DFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNV 160 (429)
Q Consensus 81 sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~ 160 (429)
+||||+||||+|+|||++|+++|+.++.+++.+|+.+.++++.||+++|||++|+++++++++++++..+..+++.....
T Consensus 81 sFEEVa~LLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~l~~~p~~ahpm~~L~~~~s~l~a~~~~~~d~~~~~~~~~~ 160 (426)
T 1k3p_A 81 NYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIA 160 (426)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCSCCTTTHHHHTTSCTTSCHHHHHHHHHTTHHHHCGGGCCTTCHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 99999999977998736677888889886444759999999847744672677778877664126643446766789999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHH
Q ss_conf 99999999999999999727985348886424688778764289841014796999998756350136787630155554
Q gi|254780355|r 161 SLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRL 240 (429)
Q Consensus 161 a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~ 240 (429)
+.+|+|++|+++|++||++.|++++.|+++++|++||++||++.....++++|..+++||++||||||||+|+||||+|+
T Consensus 161 ~~~liA~~p~i~A~~~r~~~g~~~~~P~~~ls~aenfl~m~~~~~~~~~e~~~~~~~~l~~~lvl~adHg~n~St~aar~ 240 (426)
T 1k3p_A 161 AFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRT 240 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSCCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 99998888999999999964788778988757799999998379865567898999999989754302677604999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 42056542467767554210022203528999998621553512799999982147861430277435555403468999
Q gi|254780355|r 241 AGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRE 320 (429)
Q Consensus 241 vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~ 320 (429)
++||++|+|+|++||+++|+||+||||||+|++||++|++.+++++++.+.+++++..|||||||||||++|||+++|++
T Consensus 241 ~ast~~d~~~~~~aai~al~GplHGGA~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ri~GfGH~vy~~~DPRa~~l~~ 320 (426)
T 1k3p_A 241 AGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFFRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRE 320 (426)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHSSCTTTTTGGGSTTSSSTTSTTTTSTTTCCSSCCTTTTBCCSSCSSCCTTHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 97058637789999998636988787899999999983683331899999986314661115587778999936899999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998886087765179999999999961153145798778447889999984999668589999999989999999997
Q gi|254780355|r 321 TMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMI 400 (429)
Q Consensus 321 ~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~ 400 (429)
+++++.++.+. .+++++++.++|+++.++++|.+|++|||||||+|++|++||||+++||++|++||++||+|||+||+
T Consensus 321 ~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~k~l~pNvD~~~~~l~~~lGip~~~~t~lf~i~R~~Gw~AH~~Eq~ 399 (426)
T 1k3p_A 321 TCHEVLKELGT-KDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMH 399 (426)
T ss_dssp HHHHHHTTSCT-TSTTTTHHHHHHHHHHHCHHHHHTTCCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998486-22799999999999987566136899868178999999980979566349999999999999999998
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCHHHC
Q ss_conf 0789830045621058876870685542
Q gi|254780355|r 401 VDPSRRIGRPRQLYTGALKRDYVPLEER 428 (429)
Q Consensus 401 ~~~~~ri~RP~~~Y~G~~~r~y~pi~~R 428 (429)
+++ .||+|||++||||.+|+|+|+++|
T Consensus 400 ~~~-~riiRPr~~YvG~~~r~~~~~~~R 426 (426)
T 1k3p_A 400 SDG-MKIARPRQLYTGYEKRDFKSDIKR 426 (426)
T ss_dssp HTT-CCCCCCEEEECSCCSCCCCCSCCC
T ss_pred HCC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 569-985076760149999889982349