HHsearch results for GI: 254780355 and protein with PDBid: 2ibp_A
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, catenane, transferase; 1.60A {Pyrobaculum aerophilum str}
Probab=100.00 E-value=0 Score=861.50 Aligned_cols=397 Identities=35% Similarity=0.582 Sum_probs=367.9
Q ss_pred CCCCEEEEEECCEEEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHC
Q ss_conf 99876999989989997523077787510100115586189888878623878756543344777898993199997508
Q gi|254780355|r 1 MTDKFAKLHLGHEEIDLPIKEGSLGSSVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKS 80 (429)
Q Consensus 1 M~~~~~~l~~~~~~~~lpi~~~~~~~~~~d~~~l~~~G~~~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~ 80 (429)
||+++.+.+.+||..+- +.|+ +++|+.+|.+|+|+||+|||++|+|+||||+|+||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~-----~~~~---------------~~~GL~gv~v~~t~Is~IDg~~G~L~YRG~~i~dLa~~~ 60 (409)
T 2ibp_A 1 MSEQTVQVKTTGKILQS-----PCGP---------------IIHGLEDVLIKSTSISDIDGEKGILWYRGYRIEELARLS 60 (409)
T ss_dssp --CEEEEEEESSCEECC-----TTSC---------------EEGGGTTCEEEEECSEEEETTTTEEEETTEEHHHHHHHC
T ss_pred CCCCCCEEEECCCEECC-----CCCC---------------CCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHHCC
T ss_conf 98645234412744104-----6676---------------567889976837768327488877989885499986059
Q ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC----------
Q ss_conf 9899999998187999899999999886406899899999985124765257899999998752068557----------
Q gi|254780355|r 81 DFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSG---------- 150 (429)
Q Consensus 81 sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~---------- 150 (429)
+||||+||||+|+|||++|+++|+.++++++.+|+++.++++.+|+ .|||++++++|++|++++++..+
T Consensus 61 sfEEVa~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~~p~-~~p~~~l~~~v~~l~~~~~~~~~~~~a~~~~~~ 139 (409)
T 2ibp_A 61 TYEEVSYLILYGRLPTKRELEDYINRMKKYRELHPATVEVIRNLAK-AHPMFALEAAVAAEGAYDEDNQKLIEALSVGRY 139 (409)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHHHHTTT-SCHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 9999999997687989899999999998733588899999986554-087277788888764028541346776411221
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCC
Q ss_conf -6787889888999999999999999997279853488864246887787642898410147969999987563501367
Q gi|254780355|r 151 -VQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADH 229 (429)
Q Consensus 151 -~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADH 229 (429)
..+++...+.+.+|+|++|+++|++||+++|++++.|+++++|++||++||++. ++++..+|+||++|||||||
T Consensus 140 ~~~~~~~~~~~a~~lia~~p~i~a~~~r~~~g~~~~~p~~~~~~a~nfl~ml~g~-----~~~~~~~~~l~~~Lil~aDH 214 (409)
T 2ibp_A 140 KAEEKELAYRIAEKLVAKMPTIVAYHYRFSRGLEVVRPRDDLGHAANFLYMMFGR-----EPDPLASRGIDLYLILHADH 214 (409)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHSS-----CCCHHHHHHHHHHHHHTSCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHCCC
T ss_conf 1004678999999999865315899999976998878987647999999985389-----99989999999887464158
Q ss_pred CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH-CCCCCEEECCCCCCC
Q ss_conf 8763015555442056542467767554210022203528999998621553512799999982-147861430277435
Q gi|254780355|r 230 EQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKD-KNDPFRIMGFGHRVY 308 (429)
Q Consensus 230 e~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~~v~~~i~~~~~-~~~~~ri~GfGHrvy 308 (429)
|+|+||||+|+++||++|+|+|++||+++|+||+|||||++|++||++++++++++.++.+.+. +++ ||||||||||
T Consensus 215 ~~n~Stfa~R~vaSt~ad~y~a~~aa~~al~GplHgga~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~i~GfGH~vy 292 (409)
T 2ibp_A 215 EVPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGANEMAVRNYLEIGTPAKAKEIVEAATKPGGP--KLMGVGHRVY 292 (409)
T ss_dssp SCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHCCGGGHHHHHHHHTSTTCC--CCTTBCCSSC
T ss_pred CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCCCCCCC
T ss_conf 88730377877761376502367888888425456760799999999827802257899999851587--4547887546
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 55540346899999998886087765179999999999961153145798778447889999984999668589999999
Q gi|254780355|r 309 RNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVAR 388 (429)
Q Consensus 309 k~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R 388 (429)
|.+|||+.+|+++++++....+. ...+++++.++++.++++++|..|++|||||||+|++|+.||||+++||++|++||
T Consensus 293 ~~~DPRa~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~k~l~pNvD~~~~~l~~~lGip~~~~~~lF~i~R 371 (409)
T 2ibp_A 293 KAYDPRAKIFKEFSRDYVAKFGD-PQNLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTPIFAMSR 371 (409)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHCC-TTCHHHHHHHHHHHHHHCHHHHHTTCCBCGGGTHHHHHHHHTCCGGGHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 78999279999999999998287-30678899999999998874136898717288999999991979566679999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHC
Q ss_conf 9899999999970789830045621058876870685542
Q gi|254780355|r 389 TAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPLEER 428 (429)
Q Consensus 389 ~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi~~R 428 (429)
++||+|||+||+++ +||+||+++||||.+|+||||++|
T Consensus 372 ~~Gw~AH~~Eq~~~--~~liRP~~~YvG~~~r~~~pi~~R 409 (409)
T 2ibp_A 372 VVGWVAHVLEYWEN--NRIFRPRACYIGPHDLQYIPLEQR 409 (409)
T ss_dssp HHHHHHHHHHHGGG--CCCCCCEEEECSCCCCCCCCGGGC
T ss_pred HHHHHHHHHHHHHC--CCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 99999999999866--987487751249999999772129